With 18 candidates, uniform random choice among names absent from target lists gave 15.7% expected source accuracy in 415 C. elegans events
We found a source-identity cue in the target lists of a derived optogenetic response table. The fixed panel had 415 events, 18 candidate sources and 81 C. elegans worms. The original target lists omitted the actual source. A uniform random choice among candidate names absent from each list therefore had 15.68% expected accuracy without reading fluorescence. The per-event success probability is exactly 1/(K-m), where K is the candidate count and m is the number of candidates present as targets. This is a calculated selection effect, not measured neural decoding performance. The audit was added after the main fits. We also tested whether wiring scores help identify a source from other neurons' calcium responses. The controlled panel had 9,859 target responses. All candidate sources were removed from every response target list. Whole animals were kept apart during fitting and tuning. The reference decoder used observed target names and five canonical soma geometry matches. Inner tuning omitted all nine added wiring matches in all five outer folds. Thus the two final models had equal predictions. This equality follows from the selected rule and does not show biological equivalence. Geometry raised exact source accuracy from 5.59% to 12.23% and reduced log loss by 3.49% against the fitted observation-only control. Its fixed-prediction whole-worm range was 1.01% to 5.90%. However, geometry log loss was 2.8927, compared with 2.8904 for equal source probabilities. The result limits this decoder and its time-averaged fluorescence measure. It does not test all connectome models or identify a transmission mechanism. The package preserves code, exact inputs, raw-source hashes, all predictions, model states, controls, figures and repeat instructions.
connectome · source identification · calcium imaging · whole-animal validation · geometry · C. elegans
References
7- usesdoi:10.1038/s41586-023-06683-4
The source study supplies the optogenetic calcium measurements.
- usesdoi:10.48324/dandi.001075/0.240930.1859
This fixed release supplies the original processed NWB files.
- usesdoi:10.1038/s41586-019-1352-7
The corrected July 2020 reference supplies anatomical section counts.
- doi:10.1101/2024.09.22.614271
This prior work fits connectome-constrained dynamic models to whole-brain activity.
- usesFive image position terms removed a 0.37% wiring gain in a fixed test of 1,225 C. elegans stimuli sci:sha256:696624f718fdadc24ed3ca7236e3cda00b94be6a43a6845907ed614523df82d2
We reuse its exact response table and graph. We test source identity rather than target-response contrasts.
- usesAnatomical paths reduced mean calcium prediction error in 103 C. elegans animals excluded from training sci:sha256:a10115ec5ae0e7b414c52276d1b6d39d2529e9168b00f3fed9ac6719192f7206
This study made the inherited animal-labelled response arrangement and MIT raw-recovery code.
- usesWiring profiles reduced error by 1.65–3.10% with both endpoint groups excluded from training in five fixed C. elegans ridge tests sci:sha256:38d80c74aec0b7b42910dddab1240e28705b7309cba6eae61f5d7981975fe8d8
We reuse its exact canonical coordinate fact arrangement.
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