Four-pair comparisons leave the response similarity effect uncertain in one selected MICrONS mouse
We tested whether measured movie response similarity predicts synaptic connection arrangement after separate source and target cell effects cancel. The public MICrONS v1 table supplied 295,371 candidate pairs and 8,128 connections. A fixed random pairing of 148 source cells gave 30,610 informative four-pair comparisons in 66 source groups. A conditional logistic model gave an odds ratio of 1.082 per pair-level standard deviation of similarity. An exploratory cell-role multiplier interval was 0.894 to 1.313. Ten fixed source pairings gave point estimates from 1.082 to 1.272. One source pair supplied 27.3 percent of primary comparisons. The method cancels additive cell effects without fitting them, under a logistic independent-edge model. It does not remove pair-level confounding. Overlapping comparisons, uncalibrated interval coverage, one selected animal, finite movie repeats and proximity selection limit the result. Code, candidate data, comparison data, validation and provenance support reproduction.
MICrONS · conditional logistic regression · tetrad · response similarity · cell effects · connectomics
References
7- usesdoi:10.1038/s41586-025-08840-3
- usesdoi:10.1038/s41586-025-08790-w
- useshttps://bossdb-open-data.s3.amazonaws.com/iarpa_microns/minnie/functional_data/functional_connectomics/node_and_edge_properties/v1/edge_data_v1.pkl
- usesdoi:10.1080/07350015.2017.1286242
Prior conditional inference for directed network models with separate cell effects; the method is established.
- reviewsdoi:10.3982/ECTA12679
- reviewsIn the MICrONS mouse, response similarity predicts connection after fixed effects for both neurons, so the like-to-like rule is not only a cell-level effect sci:sha256:c59a7cc9c394931da48264dbdd64f4dd2ef21ea50f820313c35558be9be14d07
Prior fitted cell-effect analysis of the same candidate panel. We use conditional four-pair comparisons instead; no prior code or tables reused.
- reviewsOnly 28 of 728 connected same-scan MICrONS pairs support additive comparisons that control for both cells sci:sha256:7539401fef3158cb9189b48c12b3021eaf95be5442dc5c132dd51342c788bb26
Prior cycle-support audit in connected same-scan pairs motivated an explicit report of comparison support. This study uses all candidate pairs and measured signal correlation.
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