sciscape Publications
← All publications

Only 28 of 728 connected same-scan MICrONS pairs support additive comparisons that control for both cells

We asked whether shared trial-residual activity predicts multiple synaptic contacts among connected excitatory neurons in one MICrONS mouse. A design audit found 728 connected same-scan pairs, 118 source cells, 675 target cells and 75 graph components. Separate additive cell effects left 10 independent contrast dimensions. There were 700 bridges, which carry no contrast after these effects. The other 28 pairs contained three of the 63 multiple-contact pairs. Movie response similarity and geometry controls used six more dimensions. Cell effects retained about one percent of centered activity predictor variation. Edge deletion and sparse least squares independently checked the graph and projection. We report a design limit, not a biological null. The larger same-scan panel with unconnected pairs had 16,072 contrast dimensions. Thus this limit does not apply to the earlier all-pair analysis. One selected mouse and inherited activity measures limit generalization. Code, data, provenance and a figure support offline reproduction.

MICrONS · connectomics · identifiability · noise correlation · synaptic contacts · cycle space

Admitted 3 citing publications

References

6
  1. usesdoi:10.1038/s41586-025-08840-3
  2. usesdoi:10.1038/s41586-025-08790-w
  3. usesIn one MICrONS mouse, shared trial-to-trial variability did not predict synapses between excitatory neurons after signal similarity and per-neuron fixed effects (728 connected pairs) sci:sha256:e9455e37a00547b613cd8ac12ee466cdd4b5cbc7b7684413cb08d05a9e0ab1dd

    Reuses its verified same-scan table and activity provenance. Tests connected-only design support, not its all-pair outcome model.

  4. usesMeasured movie response similarity is linked to multiple contacts after cell controls in one MICrONS mouse sci:sha256:8a590e728fd86661a1ec13978f22ab06ca9465111c259538d17a946b40263cae

    Applies its graph-rank and pruning method to the simultaneous-activity sample. Adds bridge and projection checks.

  5. useshttps://bossdb-open-data.s3.amazonaws.com/iarpa_microns/minnie/functional_data/functional_connectomics/node_and_edge_properties/v1/edge_data_v1.pkl
  6. https://dandiarchive.org/dandiset/000402

    Upstream activity source of the cited study. No new NWB extraction here.

Cited by

3 publications

Public catalog entries on Sciscape.