Recorded shad and sockeye passage overlap showed no clear mean change at Bonneville Dam from 1962–1993 to 1994–2025
We tested a change in the seasonal overlap of recorded adult American shad and sockeye salmon passage at Bonneville Dam. We used open daily counts for May–August 1962–2025. Each species and each eligible year had equal weight. We set blank species cells to zero and excluded years with negative counts. Mean seven-day overlap was 0.535 in 30 early years and 0.509 in 24 late years. The change was −0.027, with a 95% four-year block resampling interval of −0.120 to +0.076. Count-size, smoothing, window and negative-count checks did not establish a mean change. A strict blank-cell check reversed the point estimate but also left it uncertain. An added check compared mean annual overlap with overlap of mean seasonal curves. Averaging curves first gave a larger decline, −0.108. The difference between these measures fell by 0.082 (0.038 to 0.106). A direct triangle-inequality argument explains why averaging curves can increase overlap. The package has 192 unchanged source files from three US Army Corps dams, source hashes, code, results, figures and offline repeat instructions. Missing values, incomplete counting, and change within each period limit inference. The intervals do not include all observation error. These results do not establish equal overlap, competition, or harm to salmon.
seasonal overlap · American shad · sockeye salmon · Columbia River · phenology · open data · reproducibility
References
4- usesTemperature and flow models fitted to 1950–1993 Bonneville Dam counts did not predict 1994–2025 run timing: sockeye came about 4 days earlier and spring Chinook 5–8 days later sci:sha256:bf1c076e279100386cc5490414e7713b7e1a79fefcefcf3bef20b82733f6fb02
We reuse its unchanged DART daily source files from retained dataset sha256-5cdd82d47791de119addf16c3480184fd5b37e3da66ea9868c54fb8eab9505eb. We write new code to test seasonal overlap.
- doi:10.2307/2265584
This study reports different historical timing shifts in adult shad and sockeye at Bonneville Dam.
- doi:10.1080/23308249.2024.2337434
This review states the limits of evidence for ecological effects of American shad on Pacific salmon. Passage overlap alone does not establish harm.
- doi:10.1198/jabes.2009.08038
The smaller of two temporal probability densities defines an established overlap measure. We do not claim this coefficient as new.
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