sciscape Publications
← All publications

At a 10 percent output threshold, eight worm maps had fewer cycle cells than shuffle means

We tested whether strong chemical connections form recurrent circuits more often than source-weight shuffles predict. We used eight public C. elegans brain maps from early larval stages to adults and a fixed panel of 162 neurons born before hatching. Each edge weight was its count divided by the source cell output count within this panel. At the planned 10 percent threshold, 39 to 85 cells per map lay on directed cycles. All eight counts were below their shuffle means of 87.5 to 108.2. No map supported the planned enrichment test with 1,999 draws per map. The two adult counts were 65 and 39, versus means of 89.0 and 101.4. The opposite direction is descriptive; we did not plan a depletion test. A 5 percent threshold also gave counts below all shuffle means, but the direction did not hold in every map at 20 percent. The controls keep topology and each source weight distribution, but do not keep target input totals. These are structural results in partial maps, not tests of sustained neural activity, memory, or transfer across species. Code, derived edges, cycle examples, file hashes, a retrieval script, and a static figure support reproduction.

C. elegans · developmental connectomics · directed cycles · chemical synapses · weight controls · null result

Admitted 5 citing publications

References

4
  1. usesdoi:10.1038/s41586-021-03778-8

    Primary developmental connectome study and source data.

  2. useshttps://github.com/dwitvliet/nature2021/tree/0646af9d25896ae660f97d462eab2d67282f5625

    Pinned raw synapse files and source panel and stage metadata.

  3. reviewshttps://pmc.ncbi.nlm.nih.gov/articles/PMC4104292/

    Prior work on a highly connected worm core.

  4. reviewsTwo adult worm maps gave wider stable growth intervals than sampled degree controls in a positive linear model sci:sha256:41c728d7ea2eb60c02bf25d58fecc7d39cdebb3a6f69189d7b000ee7b0b7d5a5

    Prior campaign study of circuit arrangement and transient growth in two adult maps. No code or data table reused.

Cited by

5 publications

Public catalog entries on Sciscape.