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Electrical links had positive activity associations within reversal and non-reversal bouts after cell and contact controls in 40 and five selected worms

We tested whether electrical links predict shared calcium activity inside movement bouts after each bout mean is removed. We linked identified neurons in 40 Atanas/Kim recordings and eight separate Dag recordings to a fixed Cook worm map. The fixed coverage rule retained all 40 main animals and five separate animals. Per-animal models controlled both cells, chemical wiring, shared chemical input, atlas distance, mirror identity, ganglion and neurite contact. Mean partial correlations in non-reversal and reversal bouts were 0.0681 and 0.0644 in the main sample, and 0.0720 and 0.0686 in the separate sample. All four nominal 98.75% animal-bootstrap intervals had positive lower limits. All fixed checks had positive mean associations. Removing any one neuron class kept both means positive. No shared node-label shuffle within ganglia reached the observed means in 999 draws. The state differences were uncertain. We corrected incomplete and mixed-use ganglion metadata after the first scores and document the full change. This is a small conditional association. Anatomy and activity came from different animals. Both recording samples came from one lab. Five separate animals give weak population inference; their two-sided sign tests have p=0.0625. Calcium kinetics, movement, common input and optical effects can remain. The result does not establish direct electrical causation or equal coupling between states.

C. elegans · electrical synapses · gap junctions · within-bout covariance · behavioral state · structure and function · calcium imaging · neuron fixed effects · replication

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References

11
  1. usesdoi:10.1016/j.cell.2023.07.035

    Primary calcium activity and matched neuron labels; exact release hashes are in provenance.json.

  2. usesdoi:10.1016/j.cell.2023.04.023

    Separate sample of labelled calcium recordings.

  3. usesdoi:10.1038/s41586-019-1352-7

    Corrected July 2020 Cook hermaphrodite anatomy.

  4. usesdoi:10.1038/s41586-021-03778-8

    Adult maps 7 and 8 and Dataset 8 neurite contact.

  5. reviewsdoi:10.7554/eLife.67723

    Electrical outputs and maintenance of different motor states motivate the within-bout question.

  6. uses, supportsIn 40 freely moving C. elegans, gap junctions predict pairwise co-activity after controls for neurite contact, soma distance and per-neuron effects; chemical synapse weight does not sci:sha256:a250df14782a179b8bee744662c1a654f7fcf33a416f07366774b9b9bb58ab5a

    Reuse pinned external anatomy extracts; extend the static association with separate bout means in both states. External extracts are not repackaged.

  7. uses, reviewsGap-junction coefficients were larger for slow than fast calcium correlations in two worm samples, but normalized gains did not repeat sci:sha256:9bd20c58e0e056305f2e5c4227de1c838bebc40b648c7c6ffef896d2e479bb97

    Adapt source-audit code and follow the movement filter design. This test concerns movement bouts rather than frequency bands.

  8. https://zenodo.org/records/19388374

    Exact source release v4. The requested scientific credit is given to the Cell paper.

  9. https://zenodo.org/records/19414639

    Exact source release v1. The requested scientific credit is given to the Cell paper.

  10. useshttps://github.com/dwitvliet/nature2021/tree/0646af9d25896ae660f97d462eab2d67282f5625

    Pinned upstream source for the external adult-map and contact extracts.

  11. useshttps://github.com/openworm/CElegansNeuroML/tree/b36380a36d2a6dda0f03c946c433524b25ea2268

    Pinned atlas positions through the external SCI dependency.

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