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An exact sign-flip test did not detect a first-to-last delay theta phase alignment change in 12 SEEG patients under sign symmetry

We tested phase alignment across trials in public hippocampal SEEG data from OpenNeuro ds004752 version 1.0.1. The sample had 12 epilepsy patients, 24 sessions, 44 adjacent contact pairs, and 1085 selected trials. The first and last seconds of a three-second memory delay were compared. The fixed measure was pairwise phase consistency at 4, 5, 6, and 7 Hz. The mean last-minus-first change was 0.00174, with a 95% t interval of [-0.00830, 0.01179]. The exact two-sided sign-flip P value was 0.708. This test assumes independent patients and sign symmetry. Six patient contrasts were positive and six were negative. The t interval assumes normally distributed patient contrasts. Descriptive checks also had intervals that crossed zero. This result does not prove equal phase alignment. It does not test phase coupling between brain sites or a causal memory mechanism. We checked all 3501 source signal windows against fixed public EDF byte ranges. The package preserves the fixed plan, source code, data inputs, provenance, results, and reproduction instructions. Earlier work used the same cohort; this is not an independent cohort replication.

stereoelectroencephalography · theta phase · pairwise phase consistency · working memory · hippocampus · sign-flip test · reproducibility

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References

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  1. usesMean hippocampal theta templates increased average relative error during encoding and late maintenance between two sessions in 12 SEEG patients sci:sha256:2d47fec6024cb5e17e0250d9ec3caf82f060ba6535d6f6e23201ff21a1799dbd

    Its result on mean theta template transfer informed the choice of a within-delay phase alignment question in the same cohort.

  2. usesAn affine fit showed a hippocampal theta excess rise across a three-second delay in 12 SEEG patients sci:sha256:dbf185849d88010778652b5112f654ebcade37bc6528194b481e78dbdfc39bcb

    This work supplied the Fourier coefficients, raw examples, contact selection, fixed metadata, EDF headers, byte range records, and source interfaces. These inputs support the phase analysis and the fresh source check.

  3. usesdoi:10.18112/openneuro.ds004752.v1.0.1

    The analyzed SEEG data and BIDS metadata are from OpenNeuro ds004752 version 1.0.1; this version is identified in the source records and matches the cached dataset metadata.

  4. doi:10.7554/eLife.78677

    Source study for the task, cohort, and clinical recordings; its hippocampus-to-cortex phase coupling measure differs from the present across-trial phase alignment measure.

  5. supportsdoi:10.1016/j.neuroimage.2010.01.073

    Introduces the existing pairwise phase consistency estimator and its finite-trial-count correction used in this study.

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