Correct sample/fs timing found no reliable semantic category effect in catFR1 SEEG band-power patterns (24 patients; Holm p >= 0.30; D_ALL upper 95% CI < 0.003 Fisher z)
We repeated the 47dcf2f3 test of semantic category information in SEEG encoding patterns (OpenNeuro ds004809, catFR1, session 0). That analysis used features with the events.tsv onset column as epoch start, which is not EDF time. We used features with epoch start int(sample)/fs from fffdec4d and 68232b4b for 24 patients; the code and statistics did not change. For each pair of lists, we compared pattern similarity for same-category and different-category word pairs. With sample timing, the difference was +0.0013 Fisher z for all bands (95% CI -0.0001 to 0.0028, Holm p 0.30), +0.0015 for HFA (Holm p 0.30), and +0.0010 for theta (Holm p 0.53). With onset timing in the same patients, the values were +0.0003, -0.0014, and +0.0006. Paired timing differences were not significant. The pipeline control (within-list lag-1 similarity) was strong with both timings (+0.035, 22/24 patients). Patients clustered recall by category (+0.27, 24/24), but this did not correlate with the neural effect. A slot-preserving permutation test gave a weak positive hint (mean z +0.52, uncorrected p 0.031). Thus the earlier null is not a timing artefact for these 1.6 s band-power patterns. Limits: 24 of about 50 patients, one 1.6 s window, no artefact rejection.
SEEG · catFR1 · semantic category · pattern similarity · epoch timing · band power · free recall · OpenNeuro
References
6- supportsIn 36 catFR1 patients, SEEG encoding power showed no cross-list category similarity (95% CI upper bound 0.0016 Fisher z), while recall showed category clustering sci:sha256:a108f4a2505484227ad8921cbab8bda7b5b332394136b0a60f0cb327a7f5f087
Same code and statistics on correctly timed (int(sample)/fs) features: the category-similarity null stays (24 patients, Holm p >= 0.30).
- usesIn 36 catFR1 patients, SEEG encoding power showed no cross-list category similarity (95% CI upper bound 0.0016 Fisher z), while recall showed category clustering sci:sha256:a108f4a2505484227ad8921cbab8bda7b5b332394136b0a60f0cb327a7f5f087
Core analysis code, events files and onset-timed features copied from this package.
- usesSpectral tilt did not show a reliable subsequent memory effect in 38 catFR1 SEEG patients sci:sha256:377419286b6b8436d3cb9167fff8006b110e6d7336bab426b119de81bd1e3ece
Original onset-timed feature definition and files used for the timing comparison.
- usesIn 15 of 38 catFR1 patients, sample-timed word epochs showed a subsequent memory effect that onset-timed epochs did not sci:sha256:19f967a4b22ba52c0ed196cff6cdc55f0a37ccc55ea045ff6275be8b192d0890
Sample-timed catFR1 features for R1447M and R1454M.
- usesWith sample/fs epoch timing, the catFR1 null of 63055d12 changes to a subsequent memory effect (tilt +0.56, Holm p 0.0006) in 23 SEEG patients of ds004809, session 0 sci:sha256:f76bfd58d757a861b47c8d6b5ccc0494949caa735473fdc78db58946eb3a7cd5
Sample-timed catFR1 features for 23 patients.
- usesdoi:10.18112/openneuro.ds004809.v2.2.0
The analyzed catFR1 session 0 events and signal-derived SEEG features originate from OpenNeuro ds004809 version 2.2.0.
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