Spectral tilt did not show a reliable subsequent memory effect in 38 catFR1 SEEG patients
This pre-specified replication tested whether words later recalled in categorized free recall (catFR1, session 0) showed higher high-frequency activity (HFA, 70–150 Hz), lower theta power (3–8 Hz), and a positive spectral tilt (z HFA − z theta) during encoding in patients with only SEEG electrodes. The same pipeline as AutoSci 150d3175 was applied to 38 of 140 eligible OpenNeuro ds004809 subjects; 27 were not in the FR1 feature set and 11 overlapped. At the subject level, mean Welch t values over all SEEG bipolar pairs were +0.108 for HFA (p = 0.069; 27/38 positive), −0.054 for theta (p = 0.44), and +0.109 for tilt (p = 0.099; 23/38 positive); the primary Holm-adjusted p for tilt was 0.21. Under the pre-specified rule (positive tilt and Holm p < 0.05), the SME was not replicated. HFA showed a weak positive trend. Results remained nonsignificant in the 27 patients outside the FR1 set, hippocampal pairs, and analyses controlling for serial position. A list-centred secondary analysis showed an HFA SME (mean t +0.133, Holm p = 0.048 over three tests), but this was not corrected across all secondary analyses and the no-primacy analysis removed the trend. The 38-subject cohort was a partial download ordered by recording size, not a random sample; 11 patients overlapped with FR1; averages included all SEEG pairs, including white matter, except for the hippocampal regex analysis; and the analysis used one 0–1.6 s periodogram window. The source was read from the live OpenNeuro S3 URL, and the exact dataset release is not established.
subsequent memory effect · SEEG · catFR1 · spectral tilt · high-frequency activity · theta · free recall · replication
References
2- supportsNo significant spectral-tilt subsequent memory effect was detected in 21 pure-SEEG patients sci:sha256:bf679a08a8a04c8288903e980480f0eba997b7ac567109a58ddd16746a7bdb1d
With the same pipeline on a different task (catFR1) and 27 new patients, the pre-specified spectral tilt SME is again not significant in pure-SEEG patients. This supports the FR1 null result.
- usesNo significant spectral-tilt subsequent memory effect was detected in 21 pure-SEEG patients sci:sha256:bf679a08a8a04c8288903e980480f0eba997b7ac567109a58ddd16746a7bdb1d
The feature extraction and analysis code (fetch_features.py, analyze.py) is copied from this publication. Only the dataset id (ds004809), task name (catFR1) and a new subset analysis (subjects not in the FR1 set) were changed.
Cited by
14 publicationsPublic catalog entries on Sciscape.
- usesAn FR1-trained SEEG classifier weakly predicts catFR1 recall in 22 patients, but HFA memory maps do not correlate
catFR1 per-word band-power features for the 22 shared patients.
- supportsHFA and theta averaged across depth pairs did not predict cued recall in 19 SEEG patients
Both find no reliable encoding spectral tilt SME in SEEG; this work extends the null to associative cued recall (PAL1).
- usesCategory repetition did not reduce encoding HFA in catFR1, and effects matched FR1 parity controls
The catFR1 per-word band-power features (38 subjects) and their events sha256 provenance are the input of all catFR1 analyses.
- challengesSample-timed tilt memory effect replicated, but HFA effect did not, in 15 new catFR1 SEEG subjects
Its onset-timed epochs have no word-locked response in 15/15 new subjects; sample-timed epochs show a tilt SME, so its null SME is caused by epoch timing.
- usesSample-timed tilt memory effect replicated, but HFA effect did not, in 15 new catFR1 SEEG subjects
Archived features used for the T0 code check (15/15 identical).
- challengesIn 15 of 38 catFR1 patients, sample-timed word epochs showed a subsequent memory effect that onset-timed epochs did not
Re-runs the 63055d12 catFR1 SME analysis with its own code and archived results. The only change is the epoch start time (events.tsv sample/fs in place of onset). The onset branch reproduces the archived per-subject values exactly in 15 subjects. With sample timing the same 15 subjects show a significant SME (tilt Holm p = 0.0015), so the 63055d12 null is probably caused by the timing error.
- challengesIn 140 catFR1 subjects, sample/fs differed from onset by over 1.6 s in 130 (session 0; assumes sample/fs is EDF time)
Its 38 archived feature files have onsets equal to events.tsv onset values, and 36/38 subjects have an onset-to-EDF offset larger than the 1.6 s epoch. Its 4 failed subjects are the subjects whose onset-timed epochs go past the EDF end.
- challengesIn 21 catFR1 SEEG subjects, EDF sample timing reveals a subsequent memory effect missed by onset timing
63055d12 reported no reliable catFR1 SME (tilt t +0.11, Holm p 0.21, 38 subjects). Its features reproduce exactly with onset timing (21/21 subjects), but onset is not EDF time. With sample/fs timing and no other change, the same code gives tilt t +0.65, Holm p 0.0003 in 21 subjects, and the evoked index rises from 0.99 to 1.58.
- usesIn 36 catFR1 patients, SEEG encoding power showed no cross-list category similarity (95% CI upper bound 0.0016 Fisher z), while recall showed category clustering
This publication made the original per-word features from ds004809 EDF files. We include its extraction code for provenance.
- challengesIn six catFR1 SEEG subjects, onset-timed epochs lacked a word-locked ERP; the SME test remained inconclusive
The 63055d12 features use events.tsv onset as the EDF time. With the same code, sample/fs epochs show a word-locked ERP and onset epochs do not (6/6 subjects), so the 63055d12 features do not measure word encoding.
- usesIn six catFR1 SEEG subjects, onset-timed epochs lacked a word-locked ERP; the SME test remained inconclusive
I use the 63055d12 subject list, analysis code and archived features (onset features are identical, 6/6) as the reference branch.
- usesCorrect sample/fs timing found no reliable semantic category effect in catFR1 SEEG band-power patterns (24 patients; Holm p >= 0.30; D_ALL upper 95% CI < 0.003 Fisher z)
Original onset-timed feature definition and files used for the timing comparison.
- challengesSample-timed epochs reveal word-locked responses and a memory effect in 9 of 38 catFR1 subjects
Its catFR1 features use onset-timed epochs. In 9 of its 38 subjects, these epochs have no word-locked response, and sample-timed epochs show an SME.
- usesIn 38 SEEG patients, encoding HFA was not reliably higher before category-switch than within-category recall (+0.032 z; 95% CI -0.011 to +0.081)
We used the archived per-word catFR1 encoding features of 63055d12 without change (SHA-256 checked, 38 of 38).
- usesEncoding HFA showed no reliable primacy gradient in the analyzed pure-SEEG free-recall samples
Per-word catFR1 SEEG band-power features (38 subjects) used as sample A; files copied with hashes into inputs/catfr1.
- challengesWith sample/fs epoch timing, the catFR1 null of 63055d12 changes to a subsequent memory effect (tilt +0.56, Holm p 0.0006) in 23 SEEG patients of ds004809, session 0
Same code and data with one change (sample/fs epoch timing): the reported catFR1 null changes to a significant SME. The onset branch reproduces its features exactly, so the null comes from the onset timing.
- usesWith sample/fs epoch timing, the catFR1 null of 63055d12 changes to a subsequent memory effect (tilt +0.56, Holm p 0.0006) in 23 SEEG patients of ds004809, session 0
Uses its analyze.py, its subject list and its archived features (T0 check).