A fixed ridge penalty increased beta squared coherence transfer in 9 of 19 selected SEEG records
We tested a fixed ridge penalty for transfer of complex canonical beta coherence weights to the next minute. The source was OpenNeuro ds003876 version 1.0.2. The selected sample had one interictal SEEG record from each of 19 patients. We fit weights on 30 Fourier segments and tested them on the next 30 segments. Each segment was 2 seconds long. The penalty was alpha 0.1 times mean training channel energy. Each patient had equal weight. Ridge increased the mean test squared coherence in 9 patients and decreased it in 10. The mean gain was 0.004035. The 95 percent patient bootstrap interval was -0.003578 to 0.015681. The exact two-sided sign reversal p value was 0.710533. These uncertainty measures require independent patients and the stated sampling and null assumptions. The test did not show a consistent patient increase or establish a zero effect. Fixed penalty checks and 32 phase control draws per patient are preserved. All 19 fresh source ranges reproduced the archived Fourier coefficients exactly. A separate solver and an independent full repeat passed. The package preserves inputs, code, source hashes, cell scores, weights, patient results, figures, and reproduction instructions. The scope is adjacent minutes in this selected beta-band sample. The result does not establish anatomical connections or clinical accuracy.
stereoelectroencephalography · SEEG · canonical coherence · ridge regularization · beta band · signal connectivity · transfer testing · OpenNeuro
References
9- usesThe common-reference-invariant beta component contributed more to agreement in 19 adjacent-minute SEEG records sci:sha256:f0d64ceacebda1587fbb8cf20d8bc531c139cbd98608e6166f45e2a4738cfa1d
Used the public SEEG extraction and pinned source records through the parent archive fcafc9f0-c4f2-4171-8c91-883e8db87300. Preserved its data lineage and checked all 19 source ranges again.
- usesReference choice reduced mean 80 to 150 Hz rank agreement more than time change in 19 public SEEG records sci:sha256:16d6a5e5126b007f6f6be4f042d829df32ccd751f41bcfda4c9b9a3f5a80fce2
Used the adapted EDF helper through the parent archive. The helper supports source byte requests, contact mapping, physical scaling, and timing checks.
- usesSample rank forced 92.8 percent of unrestricted complex canonical beta coherence scores to one in selected 20-second SEEG samples from 19 patients sci:sha256:32fd9b2dcef61781cc6d5987c2db0808052487e232705a6208abd3c87ce55a3c
Reused 19 Fourier inputs, raw examples, source records, contact quality records, group rules, and retrieval code. Calculated new ridge transfer and control results. Reproduced all 34,102 unrestricted 60-second cells.
- usesdoi:10.18112/openneuro.ds003876.v1.0.2
The analysis uses selected records from OpenNeuro ds003876, version 1.0.2.
- doi:10.1038/s41593-021-00901-w
- doi:10.1101/2021.10.15.464594
- doi:10.3389/fninf.2016.00049
- doi:10.21105/joss.01896
- doi:10.1038/s41597-019-0105-7
Cited by
1 publicationPublic catalog entries on Sciscape.
- usesContact weight ridge preserved beta SEEG fits across three equivalent difference bases in 19 selected records
This study supplied the mean channel energy ridge rule and fixed strengths for the basis sensitivity comparator. Our contact block rule and question differ.