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Frequency changes input order in 90 of 423 selected Allen fit comparisons under a fixed-efficacy model

We tested whether frequency changes the strength order of two same-sign inputs to one cell in Allen cortical slice response fits. A linear model with a finite rise and fixed synaptic efficacy changed the magnitude order between 1 and 40 Hz in 90 of 423 matched fit comparisons from 393 input pairs. Nested donor means were 15.11% for mouse excitation, 26.14% for mouse inhibition and 28.47% for human excitation. Human inhibition had no reversal in ten comparisons from two inferred donors. Only 23 comparisons retained reversal under all amplitude changes by factors from 1/1.25 to 1.25 with timing fixed. These error factors are assumptions. The model omits short-term plasticity and does not measure responses to frequency modulation. Selected slice circuits, uncertain fits and inferred donor labels limit biological inference. Code, aggregate evidence, a figure and external-data retrieval instructions support reproduction.

Allen Institute · convergent inputs · synaptic filtering · frequency response · amplitude uncertainty · linear model

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References

7
  1. usesdoi:10.1126/science.abj5861
  2. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  3. https://alleninstitute.org/legal/terms-of-use
  4. reviewsFinite rise left the mean timing-penalty change unresolved in selected Allen cortical input models sci:sha256:4bc73276b818fb7a1d3f815930e84a5fa2ca05e64ba90732a7ee909d79823d1d

    Finite-rise cancellation motivated a distinct frequency-order test; no code or records reused.

  5. reviewsA factor 1.10 error bound certifies 18 of 69 fitted rise-time reversals in selected Allen cortical inputs sci:sha256:0060132152fb5fcc19d779d8dfa3666f5fdaa581070e5c5f4b530684d58e4b54

    Rise-time order and error checks motivated reporting amplitude margins; no code or records reused.

  6. https://raw.githubusercontent.com/AllenInstitute/neuroanalysis/c2fd909b73cc3167fb65d55edb3de0ab3e245ce9/neuroanalysis/fitting/psp.py
  7. https://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py

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