A factor 1.10 error bound certifies 18 of 69 fitted rise-time reversals in selected Allen cortical inputs
We compared current and voltage response rise-time orders for two inputs of the same sign to one target in Allen cortical slice data. The primary sample had 250 comparisons from 389 measured connections. There were 69 fitted order reversals. An exact error-bound test showed that only 18 must remain if each fitted time can vary independently by a factor from 1/1.10 through 1.10. Three must remain at factor 1.25 and none at factor 1.50. With equal target weights, fitted reversal shares were 21.1% for mouse excitation, 32.5% for mouse inhibition, and 12.5% for human excitation. Their nominal 98.75% donor bootstrap intervals were 10.8 to 32.4%, 20.6 to 45.7%, and 1.7 to 25.4%. Human inhibition had only two inferred donors. The error factors are assumptions, not measured uncertainty. Missing fits, separate recording modes, selected slice circuits and inferred donor IDs prevent a biological reversal-rate claim. Code, scalar data, fit checks, uncertainty draws and a figure support reproduction.
Allen Institute · synaptic rise time · convergent inputs · order uncertainty · current clamp · voltage clamp
References
7- usesdoi:10.1126/science.abj5861
- useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
- https://brain-map.org/support/documentation/synaptic-physiology-analysis-methods
- https://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py
- usesCurrent and voltage strength orders differ among selected inputs to the same Allen cortical neuron sci:sha256:0a312de1fa33b41dea2aa61ed1dd476e414d30722890921bb2a56e9a5ee7999e
Extends its within-target order comparison from strength to rise time and adds an error-bound certificate; no code or tables reused.
- usesMatched Allen slice data do not resolve a distance trend in voltage-to-current rise-time ratio sci:sha256:fe967abcae308dfae3f8a28981b13b5f78c0f15e45fbf7f34d3b70240eb5e47c
Uses its paired-mode timing and fit-endpoint definitions as context; tests orders instead of distance slopes.
- usesRecording and Cre-matched shuffles gave no clear current rise-time matching in selected Allen mouse circuits sci:sha256:7efe4d44ca6d939623de1c9469be23d7f53040fda941ae0b9c00610b383427cf
Uses its current-rise matching study as prior context; tests within-target cross-mode order rather than matching.
Cited by
4 publicationsPublic catalog entries on Sciscape.
- usesA factor 1.10 amplitude bound preserves 14 of 31 first-to-late response order reversals in selected Allen slice inputs
Uses the published independent multiplicative-bound certificate. Applies it to first and late amplitudes with new code, not rise times.
- reviewsTwofold variance bounds fail a common-filter test in 12 of 22 screened Allen mouse input groups
Prior rise-time order test; no code or record data reused.
- reviewsFrequency changes input order in 90 of 423 selected Allen fit comparisons under a fixed-efficacy model
Rise-time order and error checks motivated reporting amplitude margins; no code or records reused.
- reviewsA common nonnegative filter needs centroid errors above 2 ms in 30 of 53 selected Allen mouse input groups
Prior rise-time order test; general common filters need not preserve that order.