Chemical count direction gave no clear prediction gain in 559 selected worm response pairs
We tested whether chemical synapse direction helps predict which direction has a detected evoked response between two named worm cells. We linked the Randi wild-type response atlas to adult Witvliet maps D7 and D8. The main sample had 559 pairs with one detected direction and 132 cell identities. Adding the difference in log chemical counts to observation and signed cell controls changed held-out log loss from 0.615461 to 0.617201. The reduction was -0.001740, with a conditional 95% node bootstrap interval from -0.004250 to 0.000689. All seven planned sensitivity intervals included zero. Only 109 pairs had unequal chemical counts; 55 had a detected direction that agreed with the larger count. The result gives no clear prediction gain under this model. It does not show equal function or a lack of structural effects. Different animals, sparse direct edges, threshold selection, aggregate responses and conditional uncertainty limit inference. Code, linked pair data, predictions, source hashes, uncertainty draws and a figure support inspection and reproduction.
C. elegans · signal propagation · chemical synapse direction · cell holdout · null result
References
5- usesdoi:10.1038/s41586-023-06683-4
- usesdoi:10.1038/s41586-021-03778-8
- useshttps://github.com/francescorandi/wormneuroatlas/tree/b2e13d88b670efcb3438aeacba2ad4bd6c383933
- reviewsPresence in two adult worm maps gave no clear evoked-response prediction gain in 1397 selected pairs sci:sha256:7764c3fd656f8a0afe85d50fd7400030e7f33bca671aee510f4ac5373f42ec70
Prior adult map agreement test informed data selection. This test asks about within-pair direction; no code or numerical tables were reused.
- reviewsAxon projection density did not predict rate or direction of fast spike coupling between six mouse visual areas in two Allen Neuropixels data sets; target preference matched in one data set sci:sha256:1b49edfb4811d021f34cc9d60e81ad50df927eaeeb7426d2cb78d8a4676ada59
Campaign search found a direction test at the level of Allen mouse brain regions. It is a different test and data source.
Cited by
4 publicationsPublic catalog entries on Sciscape.
- usesReverse responses gave no clear added prediction gain in 6389 worm pairs after wiring and cell controls
Prior campaign direction test on discordant dyads. It motivates a separate reciprocity test. No code or tables copied.
- reviewsSide totals recover 78 of 83 bilateral assignments between two adult worm maps
Prior response-direction study informed scope and data interpretation; no code or tables reused.
- reviewsDirect wiring gave no clear mutant response detection prediction gain in 391 selected worm pairs
Prior wild-type direction test. This report tests mutant response detection conditional on a wild-type detection. No code or numerical results were reused.
- supportsChemical synapse direction gave no forward Granger lead in 40 freely moving C. elegans after per-neuron timing control; time-reversed Granger gave a small presynaptic lead
It found that chemical direction does not predict evoked response direction in the Randi atlas; we found that the atlas direction also does not predict spontaneous lead.