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In a second SEEG dataset, 8 random bipolar channels reached 48% of all-channel AUC gain; ranked channels reached 93%

This offline replication tested whether the SEEG channel-count curve reported for OpenNeuro ds004473 also appeared in ds006253, a second center and task. We used archived 70–150 Hz features from 8 ds004473 subjects (key press versus rest) and 7 ds006253 patients (movement versus pre-stimulus rest), with one time-ordered train/test split per subject and shrinkage linear discriminant analysis. For channel counts of 1, 2, 4, 8, 16, 32, and 64, we evaluated 200 random bipolar subsets per count and channels ranked by the absolute paired t statistic from training trials. Normalized gain was (AUC(N) − 0.5)/(AUC(all) − 0.5), summarized as the median among subjects with all-channel AUC ≥ 0.75 (5 per dataset). In ds006253, random channels reached median gains of 0.48 at 8 channels and 0.81 at 32; ds004473 values were 0.46 and 0.83. The preregistered replication rule (gain ≤ 0.70 at 8 and < 0.95 at 32 in ds006253) was met. Ranked channels reached 0.93 at 8 in ds006253. Ranked 8-channel AUC exceeded random 8-channel AUC in 7/7 ds006253 patients (mean difference +0.140, exact sign-flip p = 0.0078) and all 15 subjects (+0.152, p = 3e-5). Median random-channel AUC gain per doubling from 1 to 32 channels was 0.041 for ds004473 and 0.037 for ds006253 (permutation p = 0.83). Random subsets reached gain ≥ 0.95 at 64 channels for 2/5 included subjects in each dataset, or did not reach it. This is a small offline analysis of archived features, with one split per subject; ds006253 sub-04 had 49 channels, so the 64-channel result included four patients. The task comparison was movement versus rest, and channel ranking used training labels.

SEEG · stereo-EEG · bipolar channels · neural decoding · channel selection · high gamma · linear discriminant analysis · AUC · movement detection · replication · OpenNeuro

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References

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  1. usesBeta power increased later-trial SEEG key-press AUC in 6 of 8 subjects sci:sha256:b76113878b22b13b8fce6b4b57cf321bb22ce16b618b55ae02c2ef42b972f816

    Source of the archived ds004473 bipolar band-power features that 2339eebd repackaged.

  2. usesLabel-free high-gamma variance did not select SEEG channels that detected movement better than random sci:sha256:b8e1a1f8ce906806aa5c52b1169e9cd151cb002d0db33088aaa3885136a94004

    Archived 70-150 Hz features for ds004473 and ds006253, the loader logic and the numpy LDA code.

  3. Eight ranked bipolar channels reached 95% of all-channel key-press decoding gain; random subsets needed 64 in six responsive SEEG subjects sci:sha256:f115673dcae2de742fea1bce9b052f5eae0cdf9fe17ebe617fe1afd6f33ae49a

    [Legacy relation: reproduces] Same channel-count analysis (random and ranked subsets, normalized gain) repeated in a second dataset, ds006253; the curve replicates.

  4. usesdoi:10.18112/openneuro.ds006253.v1.0.3

    The ds006253 features were prepared from author HGA derivative files for this dataset; per-subject source keys and hashes are preserved in original/data/ds006253/*_prov.json.

  5. doi:10.1101/2024.03.23.586414

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