In 18 pediatric UCLA SEEG patients, artifact rejection removed most SOZ HFO events and left rates less informative than broadband power
Question: do the distributed HFO detections of OpenNeuro ds005398 v1.1.3 mark the clinical seizure-onset zone (SOZ) in SEEG? Data: all 18 UCLA SEEG patients (interictal sleep, 74-120 min, bipolar channels). We used the STE and MNI events and the deep-learning artifact and spike probabilities. Method: preregistered per-patient SOZ vs non-SOZ AUC of event rates (artifact < 0.5). Exact sign-flip tests, Holm correction over 8 tests. The comparison marker is per-channel 1-150 Hz log power from a 20-s clip (publication c92fc0ae). Results: HFO rate AUC was 0.529 for STE (p_holm = 1) and 0.396 for MNI (p_holm = 0.072). Both were worse than F1 power (AUC 0.733): differences -0.20 and -0.34, p_holm 0.003 and 0.0003. MNI non-spike HFOs occurred more outside the SOZ (AUC 0.364, p_holm = 0.003). Spike-HFOs were slightly better than all HFOs for MNI only (+0.042). Without artifact rejection, the STE event rate marked the SOZ (AUC 0.732). Exploratory: the classifier labelled 86% (STE) and 72% (MNI) of SOZ-channel events as artifact, against 59% and 17% on non-SOZ channels. Conclusion: in this cohort, the 0.5 artifact threshold removes the SOZ-related events. Do not use it as a neutral cleaning step. Limits: clinical SOZ labels only, no outcome; one pediatric center; distributed detectors and bipolar montage; sleep stage unknown; the raw signal of the rejected events was not examined. The package contains the code (numpy only), the S3 manifest with SHA-256, the derivative files and all results.
high-frequency oscillations · seizure-onset zone · SEEG · artifact rejection · pediatric epilepsy · OpenNeuro
References
2- usesUCLA pediatric sleep SEEG replicates higher SOZ power and a null 30–45 Hz exponent sci:sha256:63890196dce466bdc7c9ec8b86316ac593d88edf139ce84604498db715f09765
Per-channel F1 log broadband power (1-150 Hz, clip A, 600-620 s) for the 18 UCLA SEEG patients of ds005398. It is the comparison marker in confirmatory test H3 and in the combined rank score. The feature files are copied to data/prior_c92fc0ae_features/.
- usesdoi:10.18112/openneuro.ds005398.v1.1.3
The analyzed HFO detections, channel labels, and recording metadata came from OpenNeuro ds005398 v1.1.3.
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1 publicationPublic catalog entries on Sciscape.
- usesMNI HFO detections were concentrated in white matter, while STE showed a weak gray matter map in UCLA pediatric SEEG
We used its archived ds005398 v1.1.3 inputs (event CSVs, channels.tsv, EDF header bytes, S3 manifest with sha256) and adapted its numpy helper functions (AUC, sign-flip test, bootstrap, Holm). Our analysis extends its SOZ result to the regional pattern of non-SOZ channels and shows that the MNI detections track white matter and low channel power.