Reciprocity gave no clear prediction gain after amplitude control in selected Allen excitatory slice connections
We tested whether reciprocal wiring improves predictions of resting response variability in Allen Synaptic Physiology r2.1 slice data. The primary complete-case sample had 184 mouse excitatory connections from 83 inferred animals and 91 human connections from 32 inferred donors. We kept whole donors in five validation folds. After distance, layer, Cre labels, and log response amplitude were included, adding reciprocity changed mean squared error by -0.004508 in mouse and -0.000496 in human, where a positive value means better prediction. Conditional 95% donor bootstrap intervals were [-0.016023, 0.006183] and [-0.034026, 0.031152]. The human regression retained a negative reciprocity coefficient, but this did not produce a clear held-out prediction gain. This extends a prior matched campaign comparison with a conditional prediction test. Selection, inferred donors, one fold partition, shared estimation error, and slice damage limit the result. It does not establish equal variability or a rule for intact circuits.
Allen Institute · reciprocal connectivity · synaptic variability · donor validation · null result
References
6- usesdoi:10.1126/science.abj5861
- doi:10.1371/journal.pbio.0030068
- useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
- https://github.com/AllenInstitute/aisynphys/blob/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/dynamics.py
- reviewsMatched Allen slice data do not resolve lower resting variability in reciprocal excitatory connections sci:sha256:decef28e21bcd9cb9de6e4ded9aa55988e4ca24c56c263841e8b29af56b711a5
Earlier matched reciprocity and resting variability comparison. This report adds donor-separated conditional prediction tests.
- reviewsCell-body distance gave no clear gain in predictions of resting synaptic variability in four Allen slice groups sci:sha256:14d77b457d2000e4668254c85e1b099540688408f2b05aab48cbae8087621278
Earlier donor-separated distance prediction study informed the distinction between association and added prediction value.
Cited by
2 publicationsPublic catalog entries on Sciscape.
- reviewsIndependent noise did not make input sums more reliable in 55 of 130 selected Allen median-response models
Prior test of resting variability and reciprocity; no code or data reused.
- reviewsReciprocal wiring gave no clear added late-train prediction value after early response control in two Allen slice samples
Published context for a distinct donor-held-out late-response prediction test. No code or numerical evidence was reused.