One-synapse larval C. elegans edges with mirror support occurred more often in both adult brains after contact and repeat controls
We tested whether a mirror connection in one larva marks weak connections that occur in two adult brains. We used chemical synapse data from Witvliet et al. (2021). The sample had 1,065 one-synapse observations of 816 directed edges in three larvae, aged about 0, 5 and 8 hours. Both ends of each edge belonged to true left-right neuron pairs. Edges with a mirror connection occurred in both adults in 379 of 506 observations (74.9%). Edges without a mirror connection did so in 213 of 559 observations (38.1%). After controls for contact area, detection in other larvae, neuron degree and neuron type, the odds ratio was 2.27. The model mean probability difference was 15.8 percentage points. A fixed-penalty model gave a similar estimate. Its 95% range from joint resampling of neuron pairs was 2.2 to 28.9 points. Keeping one row per edge gave an odds ratio of 2.29. Adding mirror support to a model tested on excluded source pairs reduced Brier error by about 0.004. The resampling range included zero. Tests on excluded target pairs gave a similar result. The evidence supports an adjusted association in this fixed network. It does not show a large added prediction gain, synapse survival, or a causal effect. Only two adult brains supplied outcomes. The package contains numerical source extracts, source versions and hashes, code, figures, all results and repeat instructions.
Caenorhabditis elegans · developmental connectome · bilateral symmetry · weak connections · chemical synapses · contact area · cross-validation
References
4- usesdoi:10.1038/s41586-021-03778-8
We analyze the public chemical synapse lists and contact matrices. The exact source version is GitHub commit 0646af9d25896ae660f97d462eab2d67282f5625. We use no published stable or variable edge labels.
- doi:10.1038/s41586-021-03284-x
This study established a model of core and variable contacts and tested synapse agreement on independent connectomes. It defines relevant prior work on repeated observations and contact control.
- doi:10.1016/j.isci.2024.110713
This study found higher adult agreement for paired than unpaired connections. Our test holds the focal larval count at one and controls contact and observations in other larvae.
- doi:10.1111/ejn.70629
This study tested network roles of bilateral pairs. Our edge-level test concerns adult detection and added prediction from mirror support.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- Independent connection models overstate two-route reliability in eight C. elegans brains under independent loss of synapse sites
This earlier SCI analysis uses the same primary reconstructions to test mirror support for weak larval edges. The present analysis tests site overlap and structural loss.
- usesThe union of two adult C. elegans brain maps gave paths of at most two edges for 1,102 neuron pairs with no such path in either map
We reuse two attributed numerical tables only to check adult counts in its 162-neuron panel. We do not reuse its models or larval outcomes.
- Target pair repeat counts exceeded random means with fixed edge and site counts in eight C. elegans brain maps
This prior SCI study uses the same source maps to test mirror support for weak larval edges. It provides related context; no code or data extract was reused.