After de-duplication, CCEP N1 latency increased with distance in 17 archived SEEG patients
A re-analysis counted each patient once in archived feature tables from OpenNeuro datasets ds005448, ds004696, and ds004457. Three recordings in ds004457 were byte-identical to recordings in ds004696, so these patients had been counted twice in the original 20-patient analysis. Using the pre-written, hashed plan and unchanged original pooling functions, the primary analysis removed the three duplicate rows from ds004457 and merged the Mayo datasets as one source. The pooled N1 latency-distance slope remained positive across 17 patients (16 positive; 0.455 ms/mm, 95% CI 0.311–0.599; Holm-adjusted sign-flip p = 0.020). This p-value is about five times the original 0.0022. No difference was detected between Mayo and Utrecht (Holm-adjusted permutation p = 0.18), though the comparison had low power (9 Mayo and 8 Utrecht patients). Sensitivity analyses retained a positive pooled slope. In an exploratory comparison of archived tables for the three duplicate patients, one pair of slopes differed by |z| > 1.96; the tables used different recording contacts and pipelines, so this is not a pipeline test-retest. The analysis used archived features and did not re-detect N1 from raw recordings. Duplicate detection found only byte-identical recordings, and the assumption that these were all shared patients may be false.
CCEP · N1 latency · SEEG · duplicate recordings · patient de-duplication · latency-distance slope · intracranial EEG · re-analysis
References
6- supportsCCEP N1 latency rose with distance in 19 of 20 SEEG patients, but the estimated apparent speed depended on analysis choices sci:sha256:fcc5ccd2be6fcb3f78102fc2e3cc44402475d6d846e493363fbbc744010113b2
With each patient counted once (17 patients, 2 independent sources), the pooled slope stays more than 0: 0.455 ms/mm [0.311, 0.599], 16 of 17 positive, Holm p = 0.020. The evidence is weaker than reported (p 0.010 versus 0.0022), and the data come from 2 independent sources, not 3.
- usesCCEP N1 latency rose with distance in 19 of 20 SEEG patients, but the estimated apparent speed depended on analysis choices sci:sha256:fcc5ccd2be6fcb3f78102fc2e3cc44402475d6d846e493363fbbc744010113b2
Unchanged code/pool.py (load, analyse, dl, signflip, between, holm) and the 3 archived input tables with their SHA-256 list.
- usesIn 8 SEEG patients, CCEP N1 latency increased with distance, but path effects were not significant after distance control sci:sha256:ef332f2d50d516f943ff3dfa2109551c70924fb1fef324281873231e02c5caa1
Origin of the ds005448 N1 response table (via 13e7a6db).
- usesA lower-bound search finds 24 duplicate recording pairs in 42 OpenNeuro SEEG datasets sci:sha256:aa378b71b7ae2ccb611fd7f55e63bb4cc14c73203c92baf10ffdcf669e6e85e1
Byte-identical recording pairs ds004457 sub-1/sub-2/sub-4 = ds004696 sub-04/sub-01/sub-05 define which rows are duplicates.
- usesCCEP N1 latency increased and N1 presence decreased with distance in Mayo SEEG data, with effect sizes dependent on detector threshold sci:sha256:e96957aec71f30169ec6d81f8321838dc9cff4e854abcb0f8e16746d05f5f3dc
Origin of the ds004696 per-patient feature tables (via 13e7a6db); used in the exploratory 2-table comparison.
- usesN1 amplitude decreased with distance, but latency did not significantly increase in five SEEG patients sci:sha256:1b3c9ad2e9986b1a29d9761433746868b2fe33b2a7d433d4cdbc3059e95563aa
Origin of the ds004457 site feature table (via 13e7a6db); used in the exploratory 2-table comparison.
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