Across-day SEEG decoder confidence identified correct trials but probabilities remained overconfident
We tested whether confidence from an offline working-memory load decoder identifies correct trials on a later day, and whether its probabilities are calibrated. We used archived band-power features from OpenNeuro ds004752 v1.0.1 for 10 SEEG subjects and 35 target sessions. A Ledoit-Wolf shrinkage LDA distinguished set size 8 from 4, trained on all earlier-day sessions, and was compared with repeated 5-fold cross-validation within the target session. The plan was written before results were calculated. Across days, accuracy among the 50% most confident trials was 0.740 versus 0.646 across all trials (mean gain +0.094; 10/10 subjects; exact two-sided sign-flip p = 0.002). Confidence-correctness AUC was 0.638 (10/10; Holm-adjusted p = 0.006). Probabilities were overconfident: mean confidence was 0.942, accuracy was 0.646, and expected calibration error (ECE) was 0.331. Overconfidence was similar within one session (cross-day minus within-session difference -0.004; Holm-adjusted p = 0.89). The selective gain was larger across days than within a session (+0.037; 9/10; p = 0.037), but this difference was not significant after Holm correction (p = 0.074). Exploratory temperature scaling fitted using earlier days only reduced ECE from 0.307 to 0.156 (9/10 subjects; p = 0.004); this analysis was not in the plan. The analysis was offline and included 10 subjects, 20–40 test trials per target session, one time window, one feature set, and one decoder. Day was confounded with time between sessions and clinical state. The selective accuracy used confidence ranks from the full target session, so an online BCI would need to set its threshold before seeing that session.
SEEG · working memory · brain-computer interface · decoder confidence · probability calibration · selective prediction · cross-day generalization · shrinkage LDA · OpenNeuro
References
5- supportsIn 18 patients, a Platt map improved calibration of SEEG word-recall probabilities, but Brier-skill gains were small sci:sha256:99a311d7d13dd572db26fdd381103a93ee08d7d3216fbc47746dbd9fb5889a14
That work found miscalibrated SEEG decoder probabilities in ds004789 word recall. We found the same problem (ECE 0.33) in a different task and dataset (ds004752 working memory), and a post-hoc scaling fitted on training data also decreased it.
- usesAcross 10 SEEG subjects, band-power drift was greater between days, while recentered load-decoder transfer declined nonsignificantly sci:sha256:aae812f35edb18022f41c2a6afdd25ff3c8d8c2754f4003039adbe5b07ea424c
We used the archived ds004752 band-power features, artifact flags and session dates of this package as input.
- usesIn 10 SEEG subjects, pooled earlier-day training did not outperform the latest earlier-day session for new-day memory-load decoding sci:sha256:bf864cb8554499b4799160526a3dcc65ba11757ba0a74a36ffbd768393de2da1
We used the same cross-day design (train on all earlier-day sessions, per-session z-score, shrinkage LDA) and added confidence and calibration metrics.
- usesdoi:10.18112/openneuro.ds004752.v1.0.1
The archived features analyzed here were derived from OpenNeuro ds004752 v1.0.1. The saved dataset metadata identifies this exact version and gives its license as CC0.
- doi:10.7554/eLife.78677
Cited by
3 publicationsPublic catalog entries on Sciscape.
- usesArchived SEEG pipelines agree on patient decodability rankings, but shared trial noise explains about 38% of patient variance
Per-patient load 8 vs 4 AUC table (column within_auc) is one pipeline in the cross-pipeline matrix.
- usesSpectral SHAPE features do not improve cross-day SEEG working-memory load decoding
The cross-day split, shrinkage LDA and sign-flip code are adapted from this package.
- usesAn early scale reduced log loss for fixed Gaussian readers in 10 SEEG patients and 6 fMRI adults
Reuses its checked public SEEG feature archive and tests a fixed new endpoint. Its related exploratory result was known.