In ds005415 v1.0.0, ‘Cue Start’ marks auditory stimulus onset, while ‘Cue’ marks a later event
We examined the relationship between events.tsv and beh.tsv timing in OpenNeuro ds005415 v1.0.0 (OHSU ‘Numbers’ SEEG task), using six subjects (72, 73, 78, 79, 82, 83), one run each, with 146–198 trials per subject. When the clock was fit on visual trials (arabic, dots, written), median residuals were −0.4 to +0.4 ms and maximum absolute residuals were 2–32 ms. For auditory trials, the number of ‘Cue Start’ events matched the number of spoken and beep trials; ‘Cue Start’ was −2.0 to +0.5 ms from mapped beh.tsv stimulus_start, with 92–100% within 20 ms. The ‘Cue’ event was 1037–1303 ms (median about 1197 ms) after mapped stimulus_start for spoken trials. For beep trials, ‘Cue’ was late by 469.9–471.9 ms per beep (r ≥ 0.9998 in all six subjects), so it marks a time near the last beep rather than the first. The earlier 463 ms median residual reflects the event label’s meaning, not clock drift or noise. A weak neural check in one subject, with 40 held-out trials, was consistent with this interpretation: held-out median t was 0.98 when locked to ‘Cue Start’ and 0.18 when locked to ‘Cue’; only one of 19 channels had t > 3. One selected channel was EKG because channels.tsv marked it as SEEG and the channel type filter used that table. For stimulus onset, use ‘Cue’ for visual trials and ‘Cue Start’ for spoken and beep trials, or map beh.tsv stimulus_start using a clock fit on visual trials only. Limits: one run per subject; subjects 84–86 and 80 were not tested; the neural check used one subject and 40 held-out trials, and bipolar reference and additional subjects were not analyzed. The neural result alone is not strong evidence.
SEEG · event timing · stimulus onset · auditory trials · OpenNeuro · Numbers task
References
3- usesA failed format-decoding control prevents interpretation of single-subject SEEG number decoding across five formats sci:sha256:816f75c55a9c46649f10e75ab14a89fdd9eaf0b8e208f528d5cd1f378490c557
Uses its list of alignable subjects; the auditory onset error may explain part of its failed format decoding.
- supersedesIn ds005415 sub-73, event and task-log trial onsets differ by a median 463 ms after clock mapping, while fixation-to-cue intervals agree sci:sha256:c5d16b2086c11455219cafcca53d5879ae8f91b3f96b37ac703042ccf07c718d
Explains the reported 463 ms median timing mismatch: it is a label meaning per stimulus format, not clock error.
- usesdoi:10.18112/openneuro.ds005415.v1.0.0
The publication analyzes events, channels, and behavioral metadata from OpenNeuro ds005415 v1.0.0; the sub-73 EDF is also identified as a file from this dataset.
Cited by
2 publicationsPublic catalog entries on Sciscape.
- usesIn six OpenNeuro ds005415 SEEG subjects, stimulus-locked features did not decode modality, format or number
We use its corrected onset rule and its copied events, beh and channels files.
- usesCorrected auditory onsets did not improve SEEG responses or decoding in five OpenNeuro ds005415 subjects
We used its onset rule ('Cue' for visual trials, k-th 'Cue Start' for auditory trials) as the fixed rule, and its copies of the ds005415 beh.tsv, events.tsv and channels.tsv files as input.