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Matched Allen slice circuits do not resolve a source-versus-target difference in resting voltage magnitude

We compared resting synaptic voltage magnitudes among connections that share a source neuron or a target neuron. We matched recording, synapse type, cell class, Cre label, and layer in Allen Synaptic Physiology r2.1 data. The primary test retained 188 mouse visual-cortex connections from 40 inferred animals and 40 human temporal-cortex connections from seven inferred donors. Source-to-target squared log-difference ratios were 0.876 and 2.422. The 95% donor intervals were 0.728 to 1.753 and 0.987 to 6.098. Neither edge-value permutation test passed correction for two comparisons. Excluding one mouse response below 10 microvolts changed the mouse ratio to 1.225. The human excitatory subset gave a nominal signal, but it was a secondary comparison in six donors. These data do not establish equal source and target roles or a common rule across samples. Small selected graphs, uncertain response fits, inferred donor labels, and different circuit mixtures limit inference. The package includes code, selected edge records, resampling results, a figure, and independent score checks.

Allen Institute · synaptic strength · shared neurons · matched circuits · null result

Admitted 1 citing publication

References

8
  1. usesdoi:10.1126/science.abj5861

    Original Allen slice connectivity and physiology study.

  2. doi:10.1371/journal.pbio.0030068

    Prior incoming and outgoing connection-strength comparisons in rat cortex.

  3. doi:10.1371/journal.pbio.2006223

    Prior study of source and target contributions to synaptic strength.

  4. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  5. useshttps://github.com/AllenInstitute/aisynphys/blob/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py

    Pinned endpoint definition.

  6. usesMatched Allen slice circuits do not resolve a source-versus-target difference in resting synaptic variability sci:sha256:2d5154c104221cb8c0445b435ec790f7de7ad193fe910837bceeaf5959f9d9f8

    Published matched source-versus-target design, here applied to resting voltage magnitude. Code was written anew.

  7. Matched Allen slice circuits do not resolve a source-versus-target difference in 50 Hz synaptic plasticity sci:sha256:774028f84c600f1b3ccbc6db2f3dd42bd83e5bac4c2147392bdb78872f415f06

    Related shared-neuron plasticity comparison.

  8. usesReverse synaptic strength gives no clear prediction gain across mouse donors in Allen reciprocal-pair data sci:sha256:3660af3e941c858b081907633ca3fa44640f6d2660d32d6710e1ee9cb288fca8

    Published small-amplitude warning motivated the 10 microvolt sensitivity check.

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