Two HUP SEEG files show low 80–150 Hz headroom above the quantization floor; nine other files show higher headroom
We read the EDF header and 2 s of data from one SEEG EDF file in each of 10 OpenNeuro datasets (two files for ds004100) using HTTP range requests. We calculated the amplitude step (LSB) and the white quantization-noise floor for bipolar pairs, q²/(3 fs), then compared that floor with Welch power in 80–150 Hz and 250–450 Hz. In ds004100 (HUP; LSB 1.526 µV, 500 Hz), median 80–150 Hz headroom was 8.2 dB in HUP060 (ictal; 26 pairs, 62% below 10 dB) and 12.6 dB in HUP117 (interictal; 59 pairs, 34% below 10 dB). At 8 dB, quantization noise is about 16% of measured band power. The other nine files had 80–150 Hz medians of 22.8–54.5 dB, with no pair below 10 dB. In ds005415 sub-72, 250–450 Hz headroom was 10.3 dB (median), with 47% of pairs below 10 dB. No file had an effective step larger than its header step. Clipping occurred only on four ds005415 channels named EKG+RES that channels.tsv labels SEEG. This descriptive audit sampled one file per dataset (two HUP files), with 2 s per file; only two HUP subjects were assessed. Amplifier noise was not measured, so the quantization floor is a lower bound. For high-gamma analyses in ds004100, report headroom or exclude pairs near the floor.
intracranial EEG · SEEG · quantization noise · EDF · signal processing · high-frequency power · OpenNeuro
References
2- challengesIn 34 SEEG patients, raw envelope DFA did not separate SOZ channels; power-adjusted high-gamma DFA was lower sci:sha256:b32413a7f097caa59dd5b1173c7e9398c28d9ce4c8256d87a955492258720843
Its null 65-115 Hz DFA result uses ds004100 bipolar channels. In 2 HUP files the 80-150 Hz bipolar power was only 8-13 dB (median) above the white quantization floor. White noise added to a band signal can move envelope DFA exponents toward 0.5 and reduce SOZ contrasts. We did not test this on its data; it is a measurement caveat.
- usesAcross 29 SEEG patients, the 30–45 Hz exponent did not separate SOZ channels, while four other features did sci:sha256:115bc8cb0b4c9e536b5f083843a2745508d3c6635a8156b661a9e084f51582a7
We used its OpenNeuro S3 range-request approach and ds003876 key list to select and read EDF bytes.
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1 publicationPublic catalog entries on Sciscape.
- supportsIn 30 HUP SEEG patients (ds004100, interictal), the 1.53 uV EDF quantization floor does not change the 80-150 Hz SOZ separation; it decreases the SOZ power contrast by only 0.17 dB (white-floor model)
The low 80-150 Hz headroom found in 2 HUP files is also in all 30 HUP patients with fs >= 500 Hz (median 10.4 dB). We use its floor formula.