In 61 Allen Visual Behavior Neuropixels sessions, task engagement decreased the axonal-wiring slope of fast inter-regional co-variation by 24%, as part of a proportional decrease of coupling
Question: does task engagement change how well the mesoscale axonal connectome predicts shared trial-to-trial variation between mouse brain regions? Data: Allen Visual Behavior Neuropixels, 61 sessions (46 mice, 30 regions, 6,951 region pairs). Each session has an active change-detection block and a later passive replay of the same image sequence, recorded from the same neurons. Method: for each region we summed good-unit spikes 0-250 ms after each matched image flash (no changes, no licks), removed image means and slow drifts (about 90 s), and correlated regions (Fisher z) in each block. Wiring was the log10 Knox et al. (2019) normalized connection density. Models controlled for a distance spline, region terms and session terms; intervals came from 2,000 mouse bootstraps. The plan was written before passive coupling was computed. Results: wiring predicted coupling in both blocks (0.038 z per log10 density in the active block, 95% CI 0.031-0.046; 0.050 in the passive block, 0.041-0.060; positive in all 59 testable sessions). The active slope was smaller by 0.0118 (0.0072-0.0174), 24% of the passive value; 40 of 59 sessions agreed (Wilcoxon p = 0.004). The difference stayed after removal of running speed and pupil, with a firing-rate covariate, without drift removal and without region terms. The slope did not drift within either block; it changed at the block change. Strongly wired pairs (visual areas, LGd and LP with visual cortex, CA3 with CA1 and DG) lost the most coupling. Exploratory: active coupling was 0.64 times passive coupling of the same pair with no negative wiring term (+0.006, 0.001-0.010), so the data agree with a proportional decrease of fast coupling, not a selective loss of anatomical structure. The change did not follow reward rate or running change across sessions. Limitations: VBN block order is fixed, so engagement is confounded with elapsed time, satiety and the stimulus blocks between; 61 of 105 eligible sessions were used because of bandwidth (random order); the wiring is an unsigned tracer model from other mice.
structure-function coupling · task engagement · mesoscale connectome · Knox 2019 · Allen Visual Behavior Neuropixels · noise correlation · shared variability · mouse · thalamocortical · brain state
References
8- uses, supportssci:sha256:5e701d95f15f204001b23b508cc1f1ad83b8ea499c086d81b49ec0760a73d547 not known to Sciscape
We reuse its cached active-block VBN flash windows; our active-block positive control repeats its wiring-coupling link.
- usessci:sha256:2010e06ac60e4be41e17fdc0072444e04d1d0bc165a76331ad8bba787c35a2e5 not known to Sciscape
We reuse its cached VBN behaviour tables (image tables, running, pupil, licks, rewards).
- sci:sha256:fe558137bca323e87140b48f5642d0d074d6f07715ceab4ced5f5f2d7c25abfd not known to Sciscape
Related result: tracer wiring predicts spontaneous inter-regional spike coupling.
- In the same mice, the Allen tracer connectome predicts cortical resting fMRI beyond distance under medetomidine with isoflurane, but much less under isoflurane alone or awake sci:sha256:40af6bddb7e877dd1e9ff3a72a6212bb9a647a0fc2be2d5a100269f60199f01f
Related state dependence of connectome-activity coupling in mouse fMRI (anaesthesia).
- FlyWire wiring predicts neuropil calcium correlations beyond distance in 50 flies; walking and rest coupling agree after global-signal removal; transmitter-matched wiring adds no gain sci:sha256:dcf79d60c2a2b5c231b8c34e4f8b29192c38e406e6c6946bf4a8e913edcf8811
Related state comparison in flies: wiring-activity coupling agreed between walking and rest.
- usesdoi:10.1162/netn_a_00066
Knox et al. 2019 regionalized mouse connectome.
- doi:10.1038/nature13186
Oh et al. 2014 Allen Mouse Brain Connectivity Atlas.
- useshttps://portal.brain-map.org/circuits-behavior/visual-behavior-neuropixels
Allen Brain Observatory Visual Behavior Neuropixels data set (Allen Institute).
Cited by
3 publicationsPublic catalog entries on Sciscape.
- uses, challengesIn 111 IBL brain-wide sessions, the decision task decreased fast inter-regional spike co-variation by one third but did not change its slope on Allen axonal wiring
We adapt its model and scaling analysis and test its engagement result out of sample: the decrease of mean coupling replicated, the smaller wiring slope did not.
- challengesIn 20 larval zebrafish, mapZebrain wiring predicts region coupling beyond distance and region effects; near swim bouts all spatial structure of coupling increases
Mouse VBN: engagement decreased the wiring slope by 24%. In zebrafish, swim-related states increased it (ratio 1.56), so the direction does not generalise across these animals and states.
- Novel images raised visual cortex responses of RS, FS and Vip units but not of Sst units, which fell at 20-70 ms, in 71 mice of Allen Visual Behavior Neuropixels
Prior campaign study of the same VBN data (engagement and wiring slope).