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Test cell reuse cut pooled input error by 62% in seven zebrafish linear models with equal gains, known totals and matched training counts

We tested how cell pooling changes a connectome prediction test. We used released ribbon and membrane contact maps from seven zebrafish neuromasts. The main test excluded both cells of each same-direction pair together. It used 103 pairs from 60 cells. With known ribbon totals, equal cell and ribbon gains, and linear addition, contact area gave 68.5% less mean pooled share error than terminal dominance. The whole-animal bootstrap 95% interval for this decrease was 39.3% to 85.5%. We then added a descriptive control with matched training counts. Reuse of the other test cell reduced mean pooled error by 61.9%, from 0.22288 to 0.08488. The complete separate-cell loss distribution stayed fixed within every direction group. We prove this distribution equality by exchange of cell roles. We also prove two pooled-error factors for equal totals. These results show how input pooling can improve a validation score without better cell predictions. The scope is seven structural maps and the stated input model. Neural activity was not measured. The package preserves raw source workbooks, provenance, code, every split, predictions, proofs, figures and repeat instructions.

connectome · zebrafish · neuromast · validation · input pooling · ribbon synapse · membrane contact · cell groups

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References

6
  1. usesWith known cell totals and equal cell and ribbon gains, pooling reversed the mean error order of two rules in seven zebrafish neuromasts sci:sha256:beb8928d3afabe000755990a51a6afb1ec3e7e6ebff57344945bcf63a9b7286c

    We test the proposed full-block exclusion and extend its full-pool identity to partial blocks and matched training counts.

  2. usesWith terminal preferences from other cells, contact area predicted all 63 hair bundle directions in seven zebrafish neuromasts sci:sha256:45cd46da47baeb3e6201ddea7b8de228cee5435534c8799185d0d122862139ee

    Its source audit informed the sample and missing-table treatment. We wrote a new reader and checked source values independently.

  3. usesdoi:10.7554/eLife.33988

    The article gives the source circuits, measurement methods and biological scope.

  4. usesdoi:10.7554/eLife.33988.007

    The unchanged version 1 Figure 3 workbook gives the main wild-type ribbon, contact and direction data.

  5. usesdoi:10.7554/eLife.33988.012

    The unchanged version 1 Figure 5 workbook is included for the complete source audit. No mutant model result is claimed.

  6. doi:10.1111/ecog.02881

    This prior work gives the general principle of block validation for structured data.

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