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In one MICrONS mouse, similar visual responses raised shared excitatory but not shared inhibitory targets of excitatory axons; the small difference passed all pre-set tests only in non-proofread axons

Question: do excitatory axons with similar visual responses converge onto inhibitory neurons, as they do onto excitatory neurons? Data: one mouse, MICrONS visual cortex (V1, RL, AL): v1300 synaptic connections, the Allen soma E/I class model and the responses of 12,894 coregistered neurons (Ding et al. 2025). Method: for 10,878 pairs of the 148 proofread functional axons, we counted shared excitatory and shared inhibitory targets and divided by the count expected from random target choice inside 50 um cubes. Poisson models related this ratio to response similarity, with soma distance, receptive-field distance, area and layer controls. A within-group permutation of functional identities (1,000) and an axon jackknife gave uncertainty. The plan was written first. Results: similar axon pairs shared more excitatory targets (+1.7% per SD of model signal correlation; permutation p = 0.018; three measures p = 0.012-0.020). Inhibitory targets showed no effect (0.4% per SD; p = 0.61; three measures p = 0.15-0.98). The inhibitory-minus-excitatory difference was negative for all three measures (permutation p = 0.003-0.036), but every jackknife interval included zero, so the primary result is uncertain. In 4,000 functional neurons with unproofread axons and local targets, the difference passed both tests for two signal-correlation measures (-0.0098, 95% CI -0.016 to -0.003, p = 0.010; -0.0074, CI -0.014 to -0.001, p = 0.005) but not for feature similarity. Without controls, inhibitory targets also had a positive association; soma proximity and area/layer explained most of it. Limitations: one animal; E/I class only, without PV, SST or VIP subclasses; 148 proofread axons; unproofread axons can have merge errors; effects are a few percent per SD.

MICrONS · functional connectomics · inhibitory interneurons · excitatory-inhibitory wiring · like-to-like connectivity · co-innervation · non-specific pooling · mouse visual cortex · electron microscopy · Allen Institute · structure-function · null result

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References

13
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    MICrONS v1300 synaptic connections and soma E/I class model.

  2. usesdoi:10.1038/s41586-025-08840-3

    Functional node and edge tables v1 (responses, proofread axon list, similarity definitions).

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    Our null inhibitory co-innervation result agrees with non-specific pooling of excitatory input by inhibitory neurons.

  7. supportsdoi:10.1038/nn.2876

    Broad, non-specific excitatory input to inhibitory neurons.

  8. doi:10.1016/j.neuron.2023.12.013

    Reports functionally specific E-to-PV wiring; our test measures co-innervation of all inhibitory cells, not PV connection strength.

  9. usesFunctionally similar presynaptic neurons put synapses slightly closer on shared dendrites in the MICrONS mouse, but presynaptic soma position explains this; no branch-scale clustering found sci:sha256:a2b36a55aea9fb9d88a3d2aecfd55f5c7881c794a31bf342f073364a919652c4

    Column names of the headerless v1300 connections_with_nuclei export.

  10. In the MICrONS mouse, response similarity predicts connection after fixed effects for both neurons, so the like-to-like rule is not only a cell-level effect sci:sha256:c59a7cc9c394931da48264dbdd64f4dd2ef21ea50f820313c35558be9be14d07

    Like-to-like rule between excitatory neurons in the same data.

  11. In one MICrONS mouse, the other targets of an axon predict its connections beyond pairwise response similarity; the extra signal is in the top shared response modes sci:sha256:3e5fef923a07bb94d498dc9eb6b0af96089dd32ec2149a31a20966cb3e71b937

    Co-target structure of axons for excitatory targets; V1DD replication result.

  12. Selected input groups had excess movie response similarity under degree control in one MICrONS mouse sci:sha256:100b9f6bfd76176b28c79e9f524e1861b687d199ffcea463ce5119694551c1e2

    Excess response similarity in input groups of excitatory targets.

  13. Shared typed inhibitory inputs had a small adjusted link to movie response similarity in one MICrONS mouse sci:sha256:39d8642414d03fdf8dc98c23a06ce196b522117141a4986741a9f309fcfa3510

    Opposite direction: shared inhibitory inputs and response similarity of excitatory cells.

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