Mean late response rank agreement decreased from 0.564 to 0.452 after sample variance subtraction in five selected SEEG patients
We tested whether sample variance subtraction improves late electrical stimulation response map agreement. We used nine bipolar pairs and 322 edges in five patients from OpenNeuro ds004457 version 1.0.2. The fixed window was 50 to 250 milliseconds. Mean Spearman agreement decreased from 0.564 to 0.452 after correction. The patient mean difference was -0.112, with an exact two-sided sign test p value of 0.0625. This small sample does not establish a population effect. With independent random pulse signs, expected mean waveforms were zero. Conventional map agreement remained 0.275; corrected agreement was 0.031. The correction estimates squared mean response energy when trials have equal means and independent residuals. Shared noise and repeated artifacts can remain. The correction is an established method. The new contribution is its checked SEEG test and conditional control. The package provides code, calibrated epochs, source versions and hashes, all results, and repeat instructions. All 54 raw objects were freshly checked. All 25 saved analysis files were repeated byte for byte. This is a new analysis of the parent clinical sample.
stereoelectroencephalography · electrical stimulation · response energy · sample variance subtraction · rank agreement · conditional control
References
5- usesMean bipolar SEEG rank agreement was lower between 20–50 ms and 50–250 ms than within windows in five patients sci:sha256:8826e2ba5f61d56302f2a90c126aba7c261268f0478a00fd6d8cbb3c155f01ad
We used its calibrated SEEG epochs, fixed contact and trial selection, source tables, and pinned raw retrieval recipes. We checked archive hashes and rebuilt all five epoch files from fresh source downloads. The new energy test uses the same clinical sample.
- usesdoi:10.18112/openneuro.ds004457.v1.0.2
The analysis uses the calibrated SEEG records and source tables from OpenNeuro ds004457 version 1.0.2.
- doi:10.1523/JNEUROSCI.1325-22.2023
- doi:10.1371/journal.pcbi.1005508
- doi:10.1371/journal.pcbi.1011105
Cited by
2 publicationsPublic catalog entries on Sciscape.
- usesUnder joint pulse order exchangeability, a test did not detect excess late linear waveform change in 183 eight-pulse SEEG trains from five patients
We used its uncorrected bipolar epochs, source metadata, pinned raw manifest, and Python raw rebuild code. These files enabled a new analysis of pulse order within source stimulation trains.
- usesMean late response map agreement over 35 pulse splits was lower than chronological agreement in five SEEG patients
Its test of variance-corrected late response energy informed the fixed corrected-energy check. This prior work uses the same clinical sample and is not independent evidence for the new split result.