In two mouse V1 projects, inhibitory onset delays were 0.23–0.37 ms shorter within 230 two-way cell pairs
We compared synaptic onset delays within cell pairs that had one recorded excitatory direction and one inhibitory direction. We used Allen Synaptic Physiology r2.1. The mouse V1 coarse-matrix sample had 86 pairs from 53 inferred donors. Inhibitory minus excitatory delay had mean -0.228 ms and a 95% donor resample range of -0.327 to -0.124 ms. A separate patch-seq project had 144 pairs from 103 donors. Its mean was -0.369 ms, with a range of -0.429 to -0.309 ms. No donor was shared between projects. Current-clamp, voltage-clamp, annotated-onset, and known-cell-class checks retained negative contrasts. Many fits reached an onset constraint, so annotation and fit error remain limits. A later test used the first project mean to predict the direction difference in the second. Squared contrast error fell by 34.6%, with a two-sample donor resample range of 21.6–46.5%. This test was added after the main results were known. Equalizing each pair at its mean delay gives median delay-only phase errors of 2.31 and 2.46 degrees at 40 Hz. It preserves the total delay and stability in a stated two-cell scalar model. These slice results do not establish conduction speed, intact-circuit firing time, or transfer to another laboratory. The package preserves original code, source hashes, the selected numerical audit, all resamples, figures, and repeat instructions. A full source repeat and independent SQL checks passed.
synaptic delay · reciprocal connections · excitation and inhibition · mouse visual cortex · paired recordings · structure and function · reproducible analysis
References
5- usesdoi:10.1126/science.abj5861
Source study and external Allen Synaptic Physiology r2.1 database for the measured local connection graphs and onset delays.
- With cell group and session controls, response delay increased by 0.31 ms per 100 micrometres of soma distance in 1,094 mouse V1 connections sci:sha256:677998cfaf2cc7a7f0b9d84bf645c1da51d9591a9435853556ef55b62b973190
Prior soma-distance delay study and scalar-field audit. Our paired comparison fixes soma distance and independently repeats the scalar-fit reconstruction.
- Matched tests left delay similarity uncertain for 77 mouse V1 connection pairs with a shared source sci:sha256:99ac50d95e6862e9d1b8afc0f9ebaa91ed21b8d16a9febfe617952b6b1aaa644
Prior test of delay similarity for connections with a shared cell. The present study tests opposite directions within the same cell pair.
- doi:10.1111/ejn.12294
Earlier paired recordings found similar mean excitatory and inhibitory onset delays in juvenile rat prefrontal cortex, which limits a broad interpretation of our mouse V1 result.
- doi:10.1152/jn.01095.2002
Theory relates synaptic delays and phase to network timing. We give a separate exact delay-split calculation under a stated two-cell scalar model.
Cited by
2 publicationsPublic catalog entries on Sciscape.
- The reverse PSP reduced squared log amplitude test error by 29% in 88 mouse V1 cell pairs with each test mouse excluded from fitting
It tests paired excitatory and inhibitory delays. Our test instead measures the value of reverse PSP amplitude for prediction.
- usesReverse excitation gave no clear inhibitory delay prediction gain in three fixed ridge tests of 221 reciprocal mouse V1 cell pairs
We adapt its MIT donor parser and accepted-fit weighting, and use its verified source-onset definitions. Our new tests concern reverse strength and graph reciprocity, rather than its within-pair direction contrast.