With 8 s windows, C. elegans pairs selected for fluorescence decreases had positive mean changes relative to the earlier trend in 11 animal splits
We tested whether the sign of a calcium fluorescence change transfers between separate C. elegans animals. We used three matched 8 s windows from DANDI 001075, release 0.240930.1859. Anatomical counts came from the corrected Cook map. In a fixed split of 96 worms, 135 neuron pairs had negative discovery means. Thirty-six other worms supplied test values. Their mean after-light log change was +0.0194. Their mean change relative to the earlier trend was +0.0261. The 97.5% conditional jackknife range was +0.0039 to +0.0483. All ten specified alternative splits also gave positive group means. Seven of eleven trend ranges included zero. These splits reuse animals. For the 314-pair main panel, sign agreement was 54.8%, versus 57.8% for an always-positive rule. Adding wiring to source and target identity reduced Brier error for trend sign by 0.00119. The 97.5% range was -0.00036 to +0.00274. A higher-confidence subset gave a small gain. Only 16 main pairs had direct chemical support. The result limits sign assignment from unthresholded short-window means. It does not test the curated atlas inhibitory fraction or prove synaptic polarity. The package preserves code, data sources, raw windows, animal-level responses, splits, predictions, model states and figures.
C. elegans · connectome · calcium imaging · inhibition · response sign · animal variation · prediction · baseline trend
References
7- usesdoi:10.1038/s41586-023-06683-4
The original neural stimulation and calcium imaging study provides the biological data and context.
- usesdoi:10.48324/dandi.001075/0.240930.1859
The immutable NWB release supplies all raw fluorescence and stimulus records.
- usesdoi:10.1038/s41586-019-1352-7
The corrected July 2020 hermaphrodite map supplies anatomical counts through the inherited graph.
- usesMatched windows in 23 C. elegans worms showed no clear increase after light in the electrical count term for response correlation sci:sha256:eda663b2e736fbe5e3e3ab51205baeae61bb953d5787e8c406d0ab95f4de3b7a
We reuse its verified matched-window table, graph, event keys, source receipts, and MIT extraction and fetch code.
- Three of 22 predicted inhibitory links had negative mean calcium responses in a detected C. elegans atlas sample sci:sha256:0204dc7079f459e73e5558fa8b084080c66d67157babd526574236ad33a962fe
This related study compares molecular sign labels with selected mean calcium responses. Our test uses separate animals and no response detection selection.
- usesElectrical counts had a positive adjusted term for calcium response correlation in 23 C. elegans records, but repeat coverage changed the estimate sci:sha256:5bf1bb24d74104cc01bf6fbee0c70d840ca061284763832b34ae3d52ea035dc1
Its event keys and graph arrangement are inherited through the matched-window package.
- usesWiring features reduced calcium response error by 1.17% beyond cell identity in a fixed test across 103 C. elegans worms sci:sha256:0e5e26303629eecdd516b6e9419e39fd70425547e36bb717a69612e587e68861
Its event and neuron matching work is inherited through the matched-window package.
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