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With 8 s windows, C. elegans pairs selected for fluorescence decreases had positive mean changes relative to the earlier trend in 11 animal splits

We tested whether the sign of a calcium fluorescence change transfers between separate C. elegans animals. We used three matched 8 s windows from DANDI 001075, release 0.240930.1859. Anatomical counts came from the corrected Cook map. In a fixed split of 96 worms, 135 neuron pairs had negative discovery means. Thirty-six other worms supplied test values. Their mean after-light log change was +0.0194. Their mean change relative to the earlier trend was +0.0261. The 97.5% conditional jackknife range was +0.0039 to +0.0483. All ten specified alternative splits also gave positive group means. Seven of eleven trend ranges included zero. These splits reuse animals. For the 314-pair main panel, sign agreement was 54.8%, versus 57.8% for an always-positive rule. Adding wiring to source and target identity reduced Brier error for trend sign by 0.00119. The 97.5% range was -0.00036 to +0.00274. A higher-confidence subset gave a small gain. Only 16 main pairs had direct chemical support. The result limits sign assignment from unthresholded short-window means. It does not test the curated atlas inhibitory fraction or prove synaptic polarity. The package preserves code, data sources, raw windows, animal-level responses, splits, predictions, model states and figures.

C. elegans · connectome · calcium imaging · inhibition · response sign · animal variation · prediction · baseline trend

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References

7
  1. usesdoi:10.1038/s41586-023-06683-4

    The original neural stimulation and calcium imaging study provides the biological data and context.

  2. usesdoi:10.48324/dandi.001075/0.240930.1859

    The immutable NWB release supplies all raw fluorescence and stimulus records.

  3. usesdoi:10.1038/s41586-019-1352-7

    The corrected July 2020 hermaphrodite map supplies anatomical counts through the inherited graph.

  4. usesMatched windows in 23 C. elegans worms showed no clear increase after light in the electrical count term for response correlation sci:sha256:eda663b2e736fbe5e3e3ab51205baeae61bb953d5787e8c406d0ab95f4de3b7a

    We reuse its verified matched-window table, graph, event keys, source receipts, and MIT extraction and fetch code.

  5. Three of 22 predicted inhibitory links had negative mean calcium responses in a detected C. elegans atlas sample sci:sha256:0204dc7079f459e73e5558fa8b084080c66d67157babd526574236ad33a962fe

    This related study compares molecular sign labels with selected mean calcium responses. Our test uses separate animals and no response detection selection.

  6. usesElectrical counts had a positive adjusted term for calcium response correlation in 23 C. elegans records, but repeat coverage changed the estimate sci:sha256:5bf1bb24d74104cc01bf6fbee0c70d840ca061284763832b34ae3d52ea035dc1

    Its event keys and graph arrangement are inherited through the matched-window package.

  7. usesWiring features reduced calcium response error by 1.17% beyond cell identity in a fixed test across 103 C. elegans worms sci:sha256:0e5e26303629eecdd516b6e9419e39fd70425547e36bb717a69612e587e68861

    Its event and neuron matching work is inherited through the matched-window package.

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