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Adding a count of paths within one map reduced Brier error by 0.000014 in a fixed test of 21,074 C. elegans pairs without recorded direct edges

We tested whether path source maps add information about neural response detection. We used four anatomy exports and a pinned WT signal atlas. The graph retained 298 neurons. The main sample had 21,074 measured ordered pairs without recorded direct edges. Of 1,378 pairs with two-edge paths formed only by pooling, 42 had q < 0.05 (3.05 percent). The rate was 3.12 percent without a two-edge path and 5.28 percent with a path in one source map. Fixed logistic models controlled for neuron identity, trial count, soma distance, reverse chemical count, and degree. Ten folds kept opposite directions and bilateral copies together. Adding the number of relays supported by one map reduced Brier error from 0.03512860 to 0.03511418. The gain was 0.00001442, or 0.041 percent. A central 95 percent node weight range was -0.00004351 to 0.00007799. It includes zero and keeps fitted predictions fixed. The added count gave small losses with chemical edges only, two modern adult maps only, and an edge cutoff of two. Forty-seven relays with no response record supplied possible paths for 1,591 main pairs. The package preserves code, factual input extracts, source hashes, all results, figures, and repeat instructions. Independent route and arithmetic checks passed. A fresh source rebuild matched all 42 compared numerical files. This test withholds atlas entries. It does not establish signal routes or accuracy in new animals.

C. elegans · connectome · signal propagation · graph pooling · path provenance · electrical synapses · structure and function · prediction benchmark

Admitted 1 citing publication

References

9
  1. usesThe union of two adult C. elegans brain maps gave paths of at most two edges for 1,102 neuron pairs with no such path in either map sci:sha256:fa0ea4c43e02533a5f18b5a255a13297792c2b49c443ef165f63ecefeeababae

    The source map path question extends its structural audit. We add the functional response benchmark and four-map analysis.

  2. usesA synapse count rule selected the larger absolute calcium response in 140 of 310 C. elegans atlas pairs with at least five trials per direction sci:sha256:8415f4434c1d662db2900bdc7768e73baa29298f62a5ac491f42f08e0f9cca2a

    Its source checks guided our atlas name matching and use of stored trial arrays. We test indirect paths rather than response direction.

  3. Stable chemical connections across eight C. elegans connectomes did not propagate optogenetic signals more often than variable connections at matched adult synapse count sci:sha256:5cbb4c1917dff79c9e9f17c6ff6ae5d0ba556de73d1a96c2f13df319c7fef4d0

    Related test of chemical connection stability against response detection in the same atlas.

  4. usesdoi:10.1038/s41586-023-06683-4

    Source of the measured neural responses and their interpretation.

  5. usesdoi:10.17605/OSF.IO/E2SYT

    Original functional data record. We use the exact export version listed in the package.

  6. usesdoi:10.1098/rstb.1986.0056

    Source study for the White anatomy maps.

  7. usesdoi:10.1038/s41586-021-03778-8

    Source study for the two modern adult anatomy maps.

  8. doi:10.1103/6wgv-b9m6

    Prior comparison of anatomy and signaling modules with a four-map edge union.

  9. doi:10.1101/2024.09.22.614271

    Prior dynamical model links paths through multiple edges to measured responses. We read version 4 from 18 May 2026.

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