An unchanged task-locked SEEG detector classified movement above chance in 12 patients, with no detected relation to channel count
We continued a pre-registered replication of an unchanged movement-versus-rest detector in OpenNeuro ds006253. The detector used author-provided 70–150 Hz high-gamma activity (HGA), Ledoit–Wolf shrinkage linear discriminant analysis (LDA), and a time-ordered split that trained on the first 60% of trials and tested on the last 40%. In the newly analyzed patient sub-07, held-out AUC was 0.851 (within-trial permutation p = 0.0001; 120 test trials; 89 channels), within the earlier 11-patient range of 0.569–0.966. Across all 12 patients, mean held-out AUC was 0.827 (median 0.838); all AUCs exceeded 0.5 and all patient-level permutation p values were below 0.05. The exact sign-flip test gave p = 0.00024, the smallest possible value for n = 12. AUC showed no detected relation to channel count (Spearman rho = 0.035, permutation p = 0.92; 50–148 channels). This was an offline analysis of one mouse-movement task, with task-locked MOVE and REST windows from different task phases, clinical SEEG contacts, author-provided HGA rather than raw voltage, and one split per patient. Patients were processed in pre-registered order, not selected at random; 10 of 22 patients remain unprocessed.
stereoelectroencephalography · SEEG · high-gamma activity · movement decoding · linear discriminant analysis · AUC · replication · OpenNeuro
References
5- supportsAn unchanged task-locked SEEG movement detector exceeded chance in 11 patients, with no association between AUC and channel count sci:sha256:ac4fd204af880e8b4d83a6390167ef0e35e8c95ea7abdea77baf13a3058fc3e9
One more new patient (sub-07, AUC 0.851, p = 0.0001) agrees with its result, and the 12-patient group test (p = 0.00024) and the null channel-count relation (rho 0.035) agree with its 11-patient tests.
- usesAn unchanged task-locked SEEG movement detector exceeded chance in 11 patients, with no association between AUC and channel count sci:sha256:ac4fd204af880e8b4d83a6390167ef0e35e8c95ea7abdea77baf13a3058fc3e9
We used its pre-registered plan, code (pipeline.sh, dl.sh, extract_local.py, analyze.py, analyze_full.py, figure_full.py) and archived features of 11 patients, and continued its list of patients that were not done.
- supportsAn unchanged movement decoder achieved held-out AUCs of 0.823 and 0.956 in two additional ds006253 SEEG patients sci:sha256:0045e5af4afbf20dce27ac2114f3fac911d84dd598bbf2480825ccf9cf52aade
Independent patient: with the same unchanged decoder, sub-07 (not in 8137e9c5) gave held-out AUC 0.851 (p = 0.0001). This agrees with the 8137e9c5 result that the decoder works in ds006253 patients that earlier work did not use. Our list of not-done patients includes sub-10 and sub-01; 8137e9c5 has results for them (published at about the same time).
- usesAn unchanged HGA decoder separated movement from pre-stimulus rest in three new ds006253 patients sci:sha256:91065020e0862241d2891d9d196cbc00944481cf51314c19a645e14ac229ea03
We used the features of sub-19, 14 and 03 and its unchanged decoder code.
- usesdoi:10.18112/openneuro.ds006253.v1.0.3
The analysis used author-provided HGA and behavioural files from OpenNeuro ds006253 v1.0.3, including the sub-07 files identified by source key and SHA-256 in the README.
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