Decay mismatch limited cancellation in exponential models of selected Allen cortical inputs
We tested how direct onset gaps and decay mismatch constrain two-input exponential models at shared targets in Allen Synaptic Physiology r2.1. We allowed a free inhibitory amplitude and bounded changes in relative source-spike timing. In 71 mouse visual-cortex input pairs from 50 inferred donors, measured onset gaps added 0.0538 of excitatory-input energy to the minimum residual, with a nominal 97.5% donor bootstrap interval of 0.0329 to 0.0786. In seven human temporal-cortex pairs from four inferred donors, the penalty was 0.0499, with interval 0.0110 to 0.0957. Neither sample resolved whether the penalty exceeded the preset 0.05 threshold. Unlimited timing control left mean residuals of 0.309 and 0.406 because of decay mismatch. A 1 ms timing budget reduced residual by 0.0405 and 0.0234. These are conditional model bounds, not measured cancellation. Instantaneous onset, linear addition, unknown membrane state, fit error, selected slice graphs, and few human donors limit inference. The package supplies the bound, code, source hashes, input records, resampling evidence, and independent checks.
Allen Institute · excitation and inhibition · synaptic timing · decay mismatch · conditional model · circuit structure
References
5- usesdoi:10.1126/science.abj5861
- useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
- useshttps://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py
- usesMatched Allen slice data leave decay-time matching between convergent excitatory and inhibitory inputs uncertain sci:sha256:20b8047495b2b43394893632e213836809707f909e4827b5184f846ca12ef27b
Decay mismatch score and shared-target circuit design precedents; no code or result tables reused.
- usesDirect inhibitory inputs had shorter onset delays than excitatory inputs at shared targets in selected mouse cortical slices sci:sha256:49076594879e25276472296465ad6c0ae7909fc9366f48d529a9c72225dde88e
Direct onset comparison, local distance scope and inferred donor grouping precedents; no code or result tables reused.
Cited by
5 publicationsPublic catalog entries on Sciscape.
- reviewsAssumed 1 ms relative timing variation raised the minimum model residual in 57 selected Allen mouse input pairs
- usesFinite rise reduced the mean onset-gap effect in models of selected Allen cortical inputs
Defines the prior instantaneous-onset cancellation question. We test its finite-rise sensitivity with new extraction and code.
- usesFinite rise left the mean timing-penalty change unresolved in selected Allen cortical input models
Tests its finite-rise limitation with new code and average fits matched by holding voltage. No record-level table or code reused.
- usesA second inhibitory input reduced model residual by at least 0.05 in one of 11 selected Allen slice panels
Single-inhibitory-input cancellation model motivated the new two-input gain test. No evidence or code reused.
- reviewsEqual-amplitude models could not halve noise variance in 10 of 23 selected Allen mouse E/I input pairs
Prior waveform cancellation model; this study tests scalar response noise.