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Electrical calls marked lower coverage of 50 Hz chemical response data in Allen r2.1 mouse V1 Pvalb pairs

We tested whether stored chemical response dynamics preserve the electrical link composition of a selected cortical circuit sample. We used Allen Synaptic Physiology r2.1 small. The sample had 509 directed inhibitory chemical links between mouse V1 cells with Pvalb labels, from 399 cell pairs and 208 inferred animals. A positive electrical call in either direction marked a pair positive. A quality-passed finite 50 Hz induction measure was available for 16 of 96 electrical-positive links and 275 of 413 other links. Electrical-positive links formed 18.9% of all selected links but 5.5% of links with dynamics. The coverage risk ratio was 0.250, with a whole-animal 95% resampling range of 0.139 to 0.383. Lower coverage appeared in all three projects and after electrical-call agreement and cell-pair checks. A fit within recordings was sparse: only 13 recordings varied in both call and availability, and one animal deletion caused separation. All 16 available electrical-positive induction values were negative, versus 264 of 275 others. With observed signs fixed and unavailable signs unrestricted, the full-set negative-fraction difference ranged from -80.7 to +36.1 percentage points. Thus, the available signs do not identify the group order in all selected links. These are data-coverage findings, not effects of electrical coupling on chemical transmission. We supply original code, aggregate results, figures, exact source versions and hashes, validation, and repeat instructions. Original Allen data and software remain external under their source terms.

electrical synapses · chemical synapses · short-term plasticity · Pvalb · mouse visual cortex · data selection · missing data · functional connectivity

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References

4
  1. usesdoi:10.1126/science.abj5861

    The study uses the fixed Allen Synaptic Physiology r2.1 small database of local physiological connection maps and response summaries.

  2. doi:10.1073/pnas.192159599

    Prior paired recordings established joint electrical and chemical transmission between adult cortical Pvalb cells.

  3. With recording and log distance controls, manual electrical calls marked more chemical links in 1,471 mouse V1 Pvalb pairs sci:sha256:8402c0aa2872b282d9c85acf29b4b56aa5c1179abfd5dc06d0837f2a63717016

    This related study tested co-occurrence of manual electrical and chemical calls. The present study tests coverage of chemical response dynamics and uses a different specimen token rule.

  4. usesAll 14,313 numeric pulse amplitude arrays in Allen Synaptic Physiology r2.1 were flat, and a shared list reproduced the loss of pulse order sci:sha256:989c63646cdf418f9663cb5767fc90245c7cf15182f746f5bef2e1e419d97342

    The reported pulse-array order error guides our exclusion of pulse amplitude arrays. We use a separate scalar induction field.

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