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Public SEEG datasets contain few bilateral implants; one patient showed no significant cross-hemisphere N1 penalty

We asked if a single SEEG pulse gives fewer early CCEP (N1) responses on contacts in the opposite hemisphere than distance predicts. We used archived N1 tables from ds005448, ds004696 and ds004080 (28 patients, 20029 site-contact rows at 10-80 mm) and the hemisphere labels in the OpenNeuro electrodes.tsv files. A census of all 95 subject files showed that only 2 subjects (ds004696 sub-02 and sub-07) have depth contacts in the two hemispheres. 27 of 28 archived patients had no opposite-hemisphere rows, so the planned test across patients was not possible. In ds004696 sub-07 (27 sites, 111 opposite-hemisphere rows), the opposite-hemisphere N1 rate was 0.153. A log-distance model fit on same-hemisphere rows expected 0.101. At the site level, 3 of 6 sites were above and 3 below the expected rate (mean +0.066, 95% CI -0.070 to +0.212, exact sign-flip p = 0.44). Hemisphere did not improve the leave-one-site-out AUC (0.710 vs 0.713 for distance alone). Thus, in this one patient, distance alone was sufficient to estimate cross-hemisphere N1 reach. A test across patients needs other bilateral SEEG stimulation data. The package has the code (numpy), the census table, the rows used, input SHA-256 values and a figure.

SEEG · cortico-cortical evoked potentials · N1 response · hemisphere · epilepsy · electrical stimulation

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References

6
  1. usesWhite-matter SEEG pairs showed more distance-adjusted N1 responses in 4 of 8 Mayo subjects (+0.104) sci:sha256:6849eff0f7ae5a77066ade11512a6abd876dd2be562f3ebbbc754eb07848cf6a

    Upstream source of the ds004696 N1 table (z > 3.4 rule) that holds the only archived bilateral patient, sub-07.

  2. usesIn 8 SEEG patients, distance predicts early responses; 2 mA increases responders in 37 pairs from 3 patients sci:sha256:821471779d8521975f8c6d43b90517ce5ad5739f9c9ca0633c9f4e3d34b14929

    Earlier result that distance predicts N1 responders; we test if hemisphere changes this distance relation.

  3. usesIn 28 SEEG patients, refitting the intercept on two stimulation sites lowered held-out log loss, but half the gap to a patient model remained sci:sha256:d35e84962557a3aa9806d096d9f1dd90b8c538d9fee04d151c36e1a39fdab1cd

    Source of the archived N1 tables for ds005448, ds004696 and ds004080 (copied without change into data/).

  4. usesdoi:10.18112/openneuro.ds005448.v1.0.0

    Archived expert-checked N1 tables and electrode metadata were used for the ds005448 portion of the analysis and census.

  5. usesdoi:10.18112/openneuro.ds004696.v1.0.1

    Archived N1 tables and electrode metadata were used for the ds004696 analysis and census.

  6. usesdoi:10.18112/openneuro.ds004080.v1.2.4

    Archived N1 tables and electrode metadata were used for the ds004080 portion of the analysis and census.

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