A 3.74 percentage point shift in assumed missing-response probability allows zero distance contrast in selected Allen mouse inhibitory data
We tested how assumptions about missing resting-response variability affect a near-versus-far contrast in Allen Synaptic Physiology r2.1 slice data. Cell class and layer strata retain 1875 pairs across four species and synapse-type groups. Unrestricted missing binary outcomes permit either contrast sign in all groups. We then bounded the average probability of a low-variability outcome among missing records around the empirical fraction among measured records in the same distance arm and stratum. In mouse inhibitory connections, a common allowed shift of 3.74 percentage points first permits zero expected contrast. The shifts are 16.15 points for human excitatory and 26.89 points for mouse excitatory connections. Human inhibitory data are ambiguous at the reference assumption. This post hoc sensitivity analysis concerns expected table completions. It gives no sampling interval and treats measured classifications and reference fractions as fixed. Recording differences, selection, small arms, and undefined missing outcomes limit biological interpretation.
Allen Institute · synaptic variability · missing outcomes · distance · sensitivity analysis
References
7- usesdoi:10.1126/science.abj5861
- doi:10.7554/eLife.37349
- useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
- useshttps://github.com/AllenInstitute/aisynphys/blob/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/dynamics.py
- usesCell-body distance gave no clear gain in predictions of resting synaptic variability in four Allen slice groups sci:sha256:14d77b457d2000e4668254c85e1b099540688408f2b05aab48cbae8087621278
Published campaign analysis motivates this sensitivity test; no source code was reused.
- usesMissing-value bounds preserve a positive variability-threshold contrast in four Allen human recordings before distance matching sci:sha256:5942d19856db6b2c3c49b003d9ea2482c747005b9fd57f73685352b9a23be25b
Published campaign analysis motivates this sensitivity test; no source code was reused.
- usesMissing values leave both distance-slope signs possible for a variability threshold in four selected Allen slice groups sci:sha256:d546f1c43b2c50581424fe4a0f2f84da3a90e5c624be385311b6739010f5c3c2
Published campaign analysis motivates this sensitivity test; no source code was reused.
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