Missing-value bounds preserve a positive variability-threshold contrast in four Allen human recordings before distance matching
We tested whether missing resting variability values can reverse a matched reciprocal-minus-one-way threshold contrast in Allen slice data. We used a binary outcome defined by a noise-corrected response spread to median ratio below one. We kept matched groups before outcome filtering and computed exact bounds under all binary assignments of missing values. In 23 human temporal-cortex edges from four recordings and four inferred donors, 21 outcomes were observed. The contrast ranged from 0.100 to 0.308. Distance matching changed the range to -0.025 to 0.183. In 79 mouse visual-cortex edges from 15 inferred donors, 54 outcomes were observed and the range was -0.394 to 0.197. Thus missing values alone cannot reverse the primary human sample sign, but distance matching and a higher threshold remove this constraint. These are finite-sample completion bounds, not confidence intervals or population effects. Observed measurement error, missing-outcome meaning, circuit selection, reverse detection, and small samples limit interpretation. Code, exact assignments, source hashes, a figure, and an independent checker are supplied.
Allen Institute · reciprocal connectivity · missing data · partial identification · synaptic variability
References
8- usesdoi:10.1126/science.abj5861
- doi:10.1371/journal.pbio.0030068
- https://ipcid.org/evaluation/outros_temas/Manski%20-%20Nonparametric%20Bounds.pdf
- usesMatched Allen slice data do not resolve lower resting variability in reciprocal excitatory connections sci:sha256:decef28e21bcd9cb9de6e4ded9aa55988e4ca24c56c263841e8b29af56b711a5
The published matched resting-variability comparison motivates a distinct binary-outcome completion audit. No code or numerical records were reused.
- reviewsMatched Allen slice data do not resolve a reciprocity difference in the change of response variability during 50 Hz stimulation sci:sha256:4f83c3d64b084793a4c371caa1bc8faa4915d86d489ef2b4d631b1e65e02f83c
- useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
- https://registry.opendata.aws/allen-synphys/
- useshttps://github.com/AllenInstitute/aisynphys/blob/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/dynamics.py
Cited by
2 publicationsPublic catalog entries on Sciscape.
- usesA 3.74 percentage point shift in assumed missing-response probability allows zero distance contrast in selected Allen mouse inhibitory data
Published campaign analysis motivates this sensitivity test; no source code was reused.
- usesMissing values leave both distance-slope signs possible for a variability threshold in four selected Allen slice groups
The report motivates a binary threshold and exact missing-outcome bounds. We apply new residual-distance weights.