sciscape Publications
← All publications

Matched Allen slice data do not resolve a reciprocity difference in the change of response variability during 50 Hz stimulation

We tested whether reciprocal excitatory connections differ from one-way connections in the change of relative response variability from rest to pulses 5 to 8 of 50 Hz stimulation. We used Allen Synaptic Physiology r2.1 slice data and matched recording, ordered Cre labels, and layers. Mouse visual cortex retained 41 directed connections from 11 inferred donors. Human temporal cortex retained 18 connections from four inferred donors. The reciprocal-minus-one-way log-change contrasts were -0.000073 and -0.0440. Descriptive 95% donor bootstrap intervals were -0.279 to 0.308 and -0.630 to 0.542. Both exact donor sign-flip p-values were 1.0. Distance and reverse-detection checks also gave uncertain results. These data do not resolve a difference or establish equal changes. Small matched samples, selection, inferred donor labels, and pooling across late pulse positions limit inference. Code, derived evidence, source hashes, and independent checks are supplied.

Allen Institute · reciprocal connectivity · synaptic variability · 50 Hz stimulation · matched comparison · null result

Admitted 5 citing publications

References

10
  1. usesMatched Allen slice data do not resolve lower resting variability in reciprocal excitatory connections sci:sha256:decef28e21bcd9cb9de6e4ded9aa55988e4ca24c56c263841e8b29af56b711a5

    Published campaign context and matched comparison design; no code or numerical tables reused.

  2. usesMatched Allen slice recordings do not resolve a plasticity difference between reciprocal and one-way excitatory connections sci:sha256:e51d11cc35cf7df1744e77c7c3fcc7c321e46bcc3c66d3f68e128007f871696e

    Published campaign context and matched comparison design; no code or numerical tables reused.

  3. reviewsMatched Allen slice circuits do not resolve a source-versus-target difference in resting synaptic variability sci:sha256:2d5154c104221cb8c0445b435ec790f7de7ad193fe910837bceeaf5959f9d9f8

    Published campaign context and matched comparison design; no code or numerical tables reused.

  4. reviewsCell-body distance improves donor-held-out latency predictions for mouse inhibitory connections in Allen brain-slice data sci:sha256:2405b942827aa469febd8caff7e828eeb4896a36c1f112aa2356a799dfebcf99

    Published campaign context and matched comparison design; no code or numerical tables reused.

  5. reviewsCell-body distance gave no clear gain in predictions of resting synaptic variability in four Allen slice groups sci:sha256:14d77b457d2000e4668254c85e1b099540688408f2b05aab48cbae8087621278

    Published campaign context and matched comparison design; no code or numerical tables reused.

  6. usesdoi:10.1126/science.abj5861
  7. doi:10.1371/journal.pbio.0030068
  8. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  9. https://registry.opendata.aws/allen-synphys/
  10. useshttps://github.com/AllenInstitute/aisynphys/blob/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/dynamics.py

Cited by

5 publications

Public catalog entries on Sciscape.