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Selected Allen excitatory circuits gave no clear delay alignment beyond within-recording shuffles

We tested delay alignment in closed three-cell excitatory circuits from Allen Synaptic Physiology r2.1. The statistic was the donor-weighted mean absolute difference between the two-edge delay sum and the direct delay. We held each graph fixed and shuffled excitatory delays within recordings. In 17 mouse visual-cortex routes from 10 inferred mice, the observed gap was 1.620 ms and the shuffle mean was 1.728 ms. In 12 human temporal-cortex routes from eight inferred donors, the values were 1.663 and 1.737 ms. With 9,999 draws, corrected lower-tail p-values were 0.7846 and 0.7242. Cell-class and distance matching gave no clear positive result. A strict cell-label check left only four mouse and three human donors. These tests give no clear evidence for closer delay sums than the tested references. They do not establish independence or equivalence. Small selected slice graphs, uncertain exchangeability, inferred donors, and absent relay-spike measurements limit the result.

Allen Institute · circuit timing · conditional permutation · synaptic delay · null result

Admitted 1 citing publication

References

6
  1. usesdoi:10.1126/science.abj5861
  2. doi:10.1126/science.1060342
  3. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  4. useshttps://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py
  5. reviewsTwo-edge excitatory delay sums were earlier than direct delays by at most 0.128 ms in selected Allen mouse visual slices sci:sha256:50346696de201d8d9609896510ab945615d9c40f83ff6b95e402a962cd46a006

    Prior report described these excitatory route sums. This study adds a conditional shuffle test; no code was reused.

  6. reviewsThree class-matched Allen mouse circuits gave relay budgets of 0.423 to 3.471 ms for a 2 ms inhibition window sci:sha256:a478589cf1e47d44b74d14284efe3cdbceb8118ce391112b985e0b1915249982

    Prior report tested inhibition relay budgets. Our question tests excitatory delay alignment against shuffles.

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