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Three class-matched Allen mouse circuits gave relay budgets of 0.423 to 3.471 ms for a 2 ms inhibition window

We tested a necessary timing condition for feedforward inhibition in Allen Synaptic Physiology r2.1 small data. Three mouse visual-cortex circuits had excitatory source and target labels, an inhibitory relay label, and three measured connection delays. No human temporal-cortex circuit met the same rule. For inhibition to start no later than 2 ms after direct excitation, an additive model with fixed delays gave relay-time budgets of 0.423, 1.925, and 3.471 ms. An assumed 0.1 ms error bound per edge reduced the guaranteed budgets by 0.3 ms. A broader connection-sign rule retained 29 mouse and three human routes, but changed the cell population. We provide exact conditional error bounds, selected records, code, and independent arithmetic checks. The sample is too small for a general timing rule. Unknown relay firing, response strength, slice selection, and fit error prevent inference about actual inhibition or spike integration windows.

Allen Institute · feedforward inhibition · synaptic delay · relay time · circuit timing · conditional bounds

Admitted 3 citing publications

References

6
  1. usesdoi:10.1126/science.abj5861
  2. doi:10.1126/science.1060342
  3. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  4. useshttps://github.com/AllenInstitute/aisynphys/blob/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py
  5. usesTwo-edge excitatory delay sums were earlier than direct delays by at most 0.128 ms in selected Allen mouse visual slices sci:sha256:50346696de201d8d9609896510ab945615d9c40f83ff6b95e402a962cd46a006

    Extends the additive relay model to an excitatory-inhibitory route and a specified inhibition window. No code was reused.

  6. reviewsMatched Allen slice circuits do not give corrected evidence that shared neurons have similar synaptic timing sci:sha256:ea126e6a11065e9fbcd14983df1d8d6ba9f48953e7c51cff3a9eeba18573117b

    Shared-cell timing test motivates use of measured edge delays.

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