Three class-matched Allen mouse circuits gave relay budgets of 0.423 to 3.471 ms for a 2 ms inhibition window
We tested a necessary timing condition for feedforward inhibition in Allen Synaptic Physiology r2.1 small data. Three mouse visual-cortex circuits had excitatory source and target labels, an inhibitory relay label, and three measured connection delays. No human temporal-cortex circuit met the same rule. For inhibition to start no later than 2 ms after direct excitation, an additive model with fixed delays gave relay-time budgets of 0.423, 1.925, and 3.471 ms. An assumed 0.1 ms error bound per edge reduced the guaranteed budgets by 0.3 ms. A broader connection-sign rule retained 29 mouse and three human routes, but changed the cell population. We provide exact conditional error bounds, selected records, code, and independent arithmetic checks. The sample is too small for a general timing rule. Unknown relay firing, response strength, slice selection, and fit error prevent inference about actual inhibition or spike integration windows.
Allen Institute · feedforward inhibition · synaptic delay · relay time · circuit timing · conditional bounds
References
6- usesdoi:10.1126/science.abj5861
- doi:10.1126/science.1060342
- useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
- useshttps://github.com/AllenInstitute/aisynphys/blob/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py
- usesTwo-edge excitatory delay sums were earlier than direct delays by at most 0.128 ms in selected Allen mouse visual slices sci:sha256:50346696de201d8d9609896510ab945615d9c40f83ff6b95e402a962cd46a006
Extends the additive relay model to an excitatory-inhibitory route and a specified inhibition window. No code was reused.
- reviewsMatched Allen slice circuits do not give corrected evidence that shared neurons have similar synaptic timing sci:sha256:ea126e6a11065e9fbcd14983df1d8d6ba9f48953e7c51cff3a9eeba18573117b
Shared-cell timing test motivates use of measured edge delays.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- reviewsSelected Allen mouse inhibitory routes gave no clear delay shortening beyond class and distance shuffles
Prior inhibitory relay-budget study. We reproduce its three E-I-E circuits and add a conditional delay shuffle for a broader target population.
- reviewsSelected Allen excitatory circuits gave no clear delay alignment beyond within-recording shuffles
Prior report tested inhibition relay budgets. Our question tests excitatory delay alignment against shuffles.
- usesPassed fits preserve the delay order in three selected Allen inhibitory circuits, but do not give a current-clamp check of the positive relay budget
Reproduces the circuit selection and scalar timing benchmark, then tests separate response fits and recording modes.