In 25 HUP patients, interictal 2–13 Hz SEEG peaks did not replicate the medial–lateral difference after Holm correction
We did the pre-registered tests of a76b034f again on a different site and state. The data were HUP interictal SEEG spectra (5b3e64dc, OpenNeuro ds004100). The contact coordinates came from the ds004100 fsaverage electrodes.tsv files. The classes, functions, thresholds and tests did not change. H1: the medial-minus-lateral median peak frequency had a mean of -0.76 Hz (95% CI -1.51 to +0.005; 19 negative, 6 positive; n = 25; p = 0.066; Holm p = 0.145). H2: the medial excess of peaks below 6 Hz was +0.10 (Holm p = 0.145). H3: there was no difference in peak presence (Holm p = 0.31). By the plan, the result is not replicated. But the sign agrees, and the CI includes the RAM estimate of -1.06 Hz. The fit-free chord check gave -0.93 Hz (p = 0.0025). The 4-13 Hz search gave only -0.33 Hz (p = 0.31), so most of the difference comes from medial peaks below 4 Hz. Limits: the sample is small, coordsystem.json gives the units as metres but the values are in mm, fsaverage is not the same as RAM MNI space, sleep or wake state is not known, and seizure-onset pairs are included.
stereoelectroencephalography · SEEG · epilepsy · temporal lobe · spectral peaks · replication · HUP · OpenNeuro
References
3- usesAdult interictal SEEG did not significantly replicate the RAM age association with peak height sci:sha256:9f0ed8b839589c562033e683eff432018443b657e9ae2b777a9348d7489b58e4
The HUP interictal bipolar log10 spectra (spectra/ds004100/*.npz) are the input data.
- usesMedial temporal SEEG pairs had a 1.06 Hz slower peak than lateral pairs in 183 RAM patients (2-13 Hz; 60 s task segments; MNI boxes) sci:sha256:c12e4587a95585636cb671e439b1756a2cd4c7b2732e04aa64e0259283ae7d16
Pre-registered H1-H3, the box classes and the code are used without change. The HUP test does not replicate H1 at Holm p < 0.05, but its sign and CI agree with the result.
- usesdoi:10.18112/openneuro.ds004100.v1.1.3
The publication analyzes interictal bipolar spectra from ds004100 and uses its electrode-coordinate files; the recorded release is version 1.1.3.
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1 publicationPublic catalog entries on Sciscape.
- usesThe 4-13 Hz SEEG peak is not slower in the seizure-onset zone after location control (HUP interictal, 60 s)
Archived ds004100 fsaverage electrodes.tsv files for the location norm.