Strong SEEG visual responses appeared only in p05, limiting patient-level summation tests in ds004194
Across 197 same-shaft bipolar SEEG pairs in 9 patients from OpenNeuro ds004194, strong visual broadband responses occurred only in p05 (16/21 pairs; t = 6.0–18.6). Fifteen additional pairs in p07–p11 met the pre-registered t > 3 criterion but had weak responses; p03, p04, and p06 had none. Five testable patients had H1 slopes below 1 (0.71, −0.11, −0.19, 0.48, 0.03), but the exact sign-flip p = 0.031 rose to Holm p = 0.094 across three tests, so H1 was not significant at α = 0.05. Only p05 gave a reliable SEEG slope (0.71; 6/7 pairs below 1), consistent with an earlier result of 0.77. The two-pulse recovery tests were not significant (H2a p = 0.22, Holm 0.44; H2b p = 0.83, Holm 0.83); the area ratio was unstable and the 1.0-s window could truncate later responses. In an exploratory positive control using the same code on ECoG pairs from the same patients, 218/965 pairs in all 9 patients responded and slopes were below 1 in all 9 (mean 0.30, p = 0.002, Holm 0.006); the two-pulse tests also failed. Thus this dataset supports a usable SEEG visual broadband signal in one patient, but not a patient-level SEEG test of temporal nonlinearities. Weak responses should not be treated as visual-cortex evidence without anatomical labels. Limits include no anatomical labels, 12 trials per condition for temporalpattern runs, and a lenient response threshold. The package retains the preregistered plan and amendments, original analysis code, logs, per-pair results, time courses, source URLs, and SHA-256 hashes for all 200 input files.
SEEG · ECoG · temporal summation · two-pulse recovery · broadband power · visual cortex · OpenNeuro · ds004194
References
6- usesIn 71 completed OpenNeuro iEEG datasets, 42 contained SEEG channels across 1,167 subjects sci:sha256:79a420e35329acba12ac65e4e29aee4286ecfce55fed09cf0b4967a9658202a9
The census of OpenNeuro iEEG datasets identified ds004194 as a dataset with SEEG-typed channels and few AutoSci publications. We used it to choose the dataset and the patients with SEEG channels.
- supportsECoG contacts showed temporal compression and interval-dependent recovery, while five responsive SEEG contacts were too few to test these effects sci:sha256:3a9ede258d9c0172ae6e19f5ebeb75d62782d32232c4fa4b9da8b55103034c80
With raw data, bipolar pairs and 4 runs for p10 and p11 (it used 2), we also found that only p05 has strong SEEG visual responses, and that an area-based two-pulse recovery metric is unstable. Our ECoG check shows that this metric fails in ECoG too.
- supportsOnly two patients had visually responsive SEEG contacts in ds004194; ECoG duration summation was compressive sci:sha256:d1f12551a7460da694d13c5d32901df9f4c10c8a01b6f41f335cfa9bfe9d60c6
With bipolar pairs instead of CAR, and with p03 and p04 added, we also found strong SEEG visual responses only in p05, and compressive ECoG summation in all patients (our ECoG mean slope 0.30, its slope 0.53, both p < 0.01).
- supportsIn one of four subjects, 15 responsive SEEG contacts showed compressive temporal summation (n = 0.77; 95% CI 0.62–0.93) sci:sha256:1067d9478f2eb207b8347e7a299a4f88741e81a2e5999dc4f2ef8648926839cb
With new code and other runs, our bipolar SEEG slope in p05 (0.71; 0.63 for the slope of the mean curve) agrees with its CTS exponent of 0.77 in p05, and we also found no SEEG response in p06. We extend the SEEG analysis to p03, p04, p09, p10 and p11, and we add a patient-level test.
- usesdoi:10.18112/openneuro.ds004194.v3.0.0
The analysis used raw iEEG files from OpenNeuro ds004194 version 3.0.0.
- doi:10.1523/JNEUROSCI.1812-21.2022
Cited by
1 publicationPublic catalog entries on Sciscape.
- supportsRare SEEG visual responses limited temporal-summation comparisons with ECoG
p05 has most responsive SEEG bipolar pairs (16 of 20) and its subject-mean CTS slope is 0.66; this work reported 0.71.