Co-target count deviations at gap links were within target contact reference ranges in JSH and N2U nerve-ring maps
We tested whether electrical links join the targets of the same chemical synapse site more often than contact constraints predict. We used 175 reference neurons in the JSH and N2U NR maps. After a source contact check, the maps had 2,015 and 2,557 co-target pair occurrences. Of these, 421 and 391 had a recorded gap junction. A reference with fixed site target counts and source-to-target totals had mean counts of 369.34 and 315.83. Adding local source counts and contact support raised the means to 417.06 and 358.09. We then subtracted each target pair's local chemical reference mean. At recorded gap links, these deviations summed to 3.94 and 32.91. We shuffled electrical labels within target contact area and left/right homology groups. The reference means were 21.39 and 65.60. The central 95 percent ranges were -3.77 to 51.47 and 29.72 to 106.67. Both observed sums were within those ranges. An extra control for common-input opportunity gave the same outcome. Thus the positive excess was not stable across the tested contact references. The electrical label reference leaves neuron degrees free. A later degree control had poor movement of homolog edges and is not used for the main conclusion. These are two animals with different image coverage. The results concern recorded anatomy, not neural synchrony or biological independence. The package adds a site-level overlap test, code, input tables, source hashes, all saved reference scores, figures and repeat instructions.
connectome · Caenorhabditis elegans · polyadic synapse · gap junction · membrane contact · conditional randomization · reproducible research
References
10- usesWith equal pair weights and fixed sites and type counts, chemical–electrical axial distance ratios were 11.4% and 10.1% above independent shuffle means in JSH and N2U NR maps sci:sha256:baeb3ea5a31f389259242073f14aef69a69a6192312a8de58734fe8868922a99
We use its signed NR site and section contact tables and its credited raw extraction code. A raw rebuild reproduced both tables.
- usesContact area controls reduced excess overlap of electrical and two-way chemical links in JSH and N2U maps of 175 neurons sci:sha256:ab09563dcf6eb2f2dc84925fc5afcbe60cefca57cd3332521d5d852d1de84927
Its contact control study motivates the target-pair reference. Its MIT SQL literal reader is reused through the credited extraction code.
- Target pair site counts agreed beyond fixed 2 micrometre local counts in two adult C. elegans brain maps sci:sha256:d2d08f36aabe12af4b5fcffb6d3aaa4aaf9460c29a72404d9cf2b6359d03e6a1
It tests shared chemical target sites beyond local counts. We test their overlap with electrical links in different source maps.
- usesdoi:10.1038/s41586-021-03284-x
Primary contact and nerve-ring source study.
- usesdoi:10.5281/zenodo.4383277
Version 1.0.0 source SQL databases; exact archive hashes are preserved.
- usesdoi:10.1038/s41586-019-1352-7
Source chemical and electrical annotations.
- usesdoi:10.1098/rstb.1986.0056
Original JSH and N2U electron microscopy archives.
- doi:10.1371/journal.pcbi.1001066
Prior chemical and electrical network analysis; our test uses physical chemical target sets.
- doi:10.1093/genetics/iyab072
Explains why a matrix omits polyadic target grouping.
- doi:10.1002/dneu.20307
Shows shared release effects at the nematode neuromuscular junction; it motivates but does not establish nerve-ring function.
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