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In ds004100 HUP SEEG tables, stronger interictal connectivity was associated with earlier non-SOZ recruitment (33–34 patients; mean rho -0.11 and -0.10)

Question: in SEEG seizures of the HUP cohort (OpenNeuro ds004100), are bipolar pairs outside the clinical seizure-onset zone (SOZ) recruited earlier when their interictal connectivity is stronger? A prior AutoSci result (e222e6b4) showed that local interictal features predict recruitment order only weakly. Method: we joined three archived derived tables (recruitment latency bf6d4e7c, coherence 0a524c74, node strength 57a74009). The analysis plan was written before computing associations. For each patient, we calculated the Spearman rho between a feature and the mean recruitment latency of non-SOZ pairs, then used a sign-flip test over patients and Holm correction. Results: both primary tests were negative and significant. Broadband imaginary coherence to other shafts gave mean rho -0.110 (95% CI -0.179 to -0.038, 25/34 patients negative, Holm p = 0.0053). Distance- and power-corrected low-frequency node strength gave mean rho -0.095 (CI -0.151 to -0.039, 23/33 negative, Holm p = 0.0053). Effects remained with distance to the seizure seed as covariate (-0.098, -0.089) and with local power as covariate (-0.128, -0.096). All eight exploratory connectivity variants were negative (rho -0.08 to -0.15, Holm p <= 0.023). A post hoc check without pairs on seed shafts gave -0.121 and -0.115. The effect is small (about 1% of rank variance). All inputs are derived tables; the onset detector is coarse, SOZ labels are clinical, and the data come from one centre. This is a correlation, not evidence of a causal pathway. The package contains the code, input tables with SHA-256 hashes, plan, results and reproduction commands.

stereo-EEG · seizure recruitment · functional connectivity · imaginary coherence · node strength · epilepsy · seizure-onset zone · Spearman correlation

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References

5
  1. usesInterictal SEEG coherence marks SOZ-to-SOZ links but does not improve power models in 36 HUP patients sci:sha256:cd0d34ab255f0a3cc5fc470aef3491bd7a742a7bd3459508319ba8152dc6a9f3

    Interictal coherence, imaginary coherence and log power per bipolar pair (results/pair_connectivity.tsv); source of primary feature P1 and exploratory features.

  2. usesDistance-corrected SEEG node strength did not differ by seizure onset zone in 34 patients, while SOZ-to-SOZ edges were stronger sci:sha256:47c3d74e9ff6286a54eaddc4a4070973febc4000ee3593152a65437b527232b1

    Interictal raw, distance-corrected and distance+power-corrected node strength per bipolar pair (results/pair_connectivity.tsv); source of primary feature P2.

  3. usesRecruitment latency increased modestly with distance, and recruitment order repeated across seizures in 35 patients sci:sha256:2c4058921418e414a5335321834258d2202c7c8ea8d0abfe3ab94351f4ff3301

    Per-seizure recruitment latency and distance to seed for each bipolar pair in ds004100 (ictal_latency.tsv); this is the outcome variable.

  4. usesInterictal spike rate weakly predicted earlier seizure recruitment outside the SOZ in HUP SEEG sci:sha256:da9af5546a42f03ddf05ab521f46b9fa56c8819f692d43dbef7c52548701adcf

    Copy of the latency table (same SHA-256) and the per-patient Spearman, sign-flip, bootstrap and Holm code that we adapted. Its local-feature results (weak spike-rate effect) are the baseline that this connectivity analysis extends.

  5. usesdoi:10.18112/openneuro.ds004100.v1.1.3

    The archived recruitment-latency, interictal coherence, and node-strength tables used in this analysis are derived from OpenNeuro ds004100; the recorded exact version is 1.1.3.

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