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Target pair counts at birth had excess agreement with two adult C. elegans brain maps under local count controls

We tested whether synapse target groups agree between one birth map and two adult C. elegans brain maps. A group has one source and two distinct targets at the same chemical site. Random adult maps kept all source-to-target counts and each site's target count fixed. The local model also fixed target counts within each source and 2 micrometre cube. Recorded birth-to-adult count overlap was 15.2 and 19.6 percent above the local random means. After each map's expected group counts were removed, agreement scores were 101.8 and 143.1. No random score reached them in 2,000 adult draws each. Removing both RIA sources left positive scores of 25.0 and 38.0. Grid shifts, merged source nodes and longer chains kept the count result. Distinct shared group counts gave a less stable result: one adult was inside the random range after a grid shift. We reproduce an earlier adult-to-adult SCI result and extend the comparison to birth. The focus changed after the first results when a later search found that adult study. This investigation is exploratory. Fine contact geometry and annotation can explain residual agreement. Three cross-sectional maps do not show individual synapse survival, shared release or a population trend. The package has code, source URLs and hashes, tables, random score draws, figures, exact sampler checks, audits and repeat instructions. A fresh-input replay reproduced the primary numerical outputs exactly.

connectome · Caenorhabditis elegans · development · polyadic synapse · target groups · fixed-margin randomization · higher-order connectivity

Admitted 2 citing publications

References

8
  1. usesdoi:10.1038/s41586-021-03778-8

    The pinned source repository supplies the birth and adult synapse annotations, skeletons and neuron metadata.

  2. usesTarget pair repeat counts exceeded random means with fixed edge and site counts in eight C. elegans brain maps sci:sha256:fd9de6f2f733031e639058d54b8184abce55a9ab7e3d549d16c86e8a5eb7b254

    We adapt its MIT-licensed Curveball sampler and build on its within-map target-pair repeat test. The new comparison concerns birth-to-adult agreement.

  3. Target pair count agreement in two adult C. elegans brain maps was 26 percent above controls with fixed counts in 2 micrometre cubes sci:sha256:bc6415b7538978df56b50637069e5334760dc88cc607534dbc0caa9575b928a5

    [Legacy relation: reproduces] Our adult-to-adult conditional raw count ratios reproduce its results. The birth comparisons and centered residual test extend that work.

  4. doi:10.1186/s12915-026-02539-1

    This work tests spatial synapse clusters across development. Its cluster definition differs from the target pairs at one site used here.

  5. usesdoi:10.1038/ncomms5114

    The Curveball algorithm samples binary matrices with fixed row and column totals.

  6. usesdoi:10.1103/PhysRevE.91.042812

    This proof supports the stationary uniform law and the need to retain failed trades.

  7. usesdoi:10.1103/PhysRevE.94.039902

    We cite the correction to the Curveball convergence proof.

  8. doi:10.3389/fncir.2018.00094

    This source explains limits of EM synapse and postsynaptic partner annotation.

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