Cook chemical links gave no clear gain over degree and distance controls in ridge tests of 0.6 s calcium forecasts from 27 C. elegans
We tested whether directed chemical links select predictors of later calcium change in 27 freely moving C. elegans during copper avoidance. Main links came from the Cook graph, corrected in July 2020. The panel had 1801 target recordings for 137 native neurons. Ridge models predicted change at one imaging frame, with a median horizon of 0.600 s. Models were fitted within each animal. Gains had free signs. Controls supplied target history, behavior, shared activity, and other recorded cells with the same class label. Each wiring reference kept input and output degree for recorded neurons. Each target kept its source counts in three distance bins. Against 99 references per animal, the mean error decrease from chemical support was -0.010%. The central 95% range from animal resampling was -0.074% to +0.048%. Date-cluster resampling also crossed zero. The longer forecast at about 3 s gave no clear gain. All four planned check ranges also crossed zero. Chemical support had 0.352% more error than all recorded interclass sources, with an animal range of 0.148% to 0.541%. This limits a fixed source selection rule. It does not measure causal transmission or reject a role for chemical synapses. Limits include incomplete observations, reference anatomy from other animals, processed calcium signals, and fixed linear models. The package preserves exact native trace subsets, source versions and hashes, code, wiring control rules and hashes, forecast rules, all model losses, figures, and repeat instructions. Original anatomical tables and graph arrays remain external, with verified reconstruction steps.
connectome · calcium imaging · Caenorhabditis elegans · forecasting · chemical synapses · graph controls · copper avoidance · structure and function
References
8- usesdoi:10.5061/dryad.w9ghx3g4v
Use all 27 recordings from Dryad version 2, API version 436401. Preserve file IDs and exact SHA-256 values.
- usesdoi:10.64898/2026.06.04.729906
Use the original copper-avoidance experiments and their neuron identity assignments. New integrator findings remain credited to these authors.
- usesdoi:10.1038/s41586-019-1352-7
Use positive chemical support from the corrected July 2020 hermaphrodite workbook. Fit gains from calcium data.
- usesdoi:10.1038/s41586-021-03778-8
Use adult dataset 8 as the planned second anatomical support. The pinned WormNeuroAtlas numerical export is recorded in provenance.
- doi:10.1101/2024.09.22.614271
Compare the connectome-constrained perturbation model, version 4 posted 18 May 2026, with this conditional forecast test in another data source.
- usesReference electrical weight showed no clear change in adjusted coactivity slopes between arena zones in 19 C. elegans sci:sha256:4b991b65c861208007e0184e74beab0be4620613a91e5bc62bac07668bfc235f
Reuse its verified native-name export and reference soma coordinate table. Independently extract native traces from source HDF5 files. Do not reuse coactivity outcomes.
- usesElectrical weights gave no clear gain for new pairs of neuron classes in a ridge test of calcium coactivity in 27 C. elegans sci:sha256:b70196e2c5ccf2d79ee2be73e1d42127553427ee3374a651ee3f718d87f94150
Credit the original label and coordinate arrangement inherited through the boundary-coactivity publication.
- Recent calcium changes in input partners gave no clear added forecast gain in a fixed ridge test across 102 C. elegans worms sci:sha256:e290098fe7564d7b8c15a899fcdf2ba13b52c8ff4f3febc9230e1f7620a79c57
Prior forecast test in 102 optogenetically stimulated worms with ten-second windows. The current study uses independent source recordings and shorter native-cell forecasts.
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