A membrane time matching term did not reduce electrical call error in a fixed test of 577 mouse V1 Pvalb pairs
We tested whether similar membrane time constants help predict electrical connection calls within a broad cortical cell label. We used Allen Synaptic Physiology r2.1 and selected 577 mouse V1 Pvalb pairs with 66 positive calls from 240 inferred mice. Both reciprocal manual calls had to agree. Both directions needed finite automated pulse coupling estimates. A fixed logistic model controlled individual time ranges, resistance, distance, layer labels, and recording conditions. Five folds kept whole mice apart. Adding the absolute log2 time difference increased test log loss by 2.09%. The 95% fixed-prediction mouse bootstrap range for the increase was 0.60% to 3.87%. A second split gave a smaller 0.37% increase, with a range that included zero. Neither project alone nor five other planned checks showed a clear gain. A broader same-Cre test used 1,715 Pvalb, Sst, or Vip pairs and also gave no clear gain. The full-data regularized matching odds ratio was 0.750, with a 95% range of 0.353 to 1.345 from 1,000 mouse bootstrap refits. That range permits a substantial association. A large imposed matching effect gave a 10.47% test gain. Independent calculations reproduced all 11,990 probabilities, and a clean repeat reproduced the numerical results. These data do not justify this matching term as a useful default in the tested rule. Selection, detection error, a broad cell label, and a small positive sample limit the result. This study does not establish biological independence or measure synchronization. The package preserves code, exact selections, source hashes, fitted states, predictions, resamples, figures, and repeat instructions.
electrical synapse · membrane time constant · Pvalb · mouse visual cortex · structure and function · out of sample prediction · synaptic physiology
References
5- usesdoi:10.1126/science.abj5861
The Allen r2.1 data release supplies the local electrical connection calls, cell physiology and recording metadata.
- doi:10.1038/47035
Prior paired recordings established electrical connectivity within distinct inhibitory cell types.
- doi:10.1073/pnas.192159599
Prior work measured electrical and chemical links among adult mouse Pvalb fast-spiking interneurons.
- usesA membrane time constant matching term gave no clear added gain in a logistic test of 8,667 mouse cortical directions sci:sha256:7954dbb608bbc71e5603325f11759773af275361537e02ddbda88d2e57d6a409
We adapt its control for individual cell time ranges to an undirected electrical-call test. All code and numerical results are new.
- usesWith pulse p < 0.05 in both directions, input resistance corrections cut squared log coupling differences by 69–75% in 38 mouse V1 pairs sci:sha256:447a0ba1c8318a398aa8465e0144a2aec08c940de7e478d84c2eb12de17c6a76
Its source audit and field interpretation guide the distinction between manual electrical calls and automated pulse measurements. We reuse no fitted result.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- usesWith recording and log distance controls, manual electrical calls marked more chemical links in 1,471 mouse V1 Pvalb pairs
We use its distinction between manual electrical calls and numerical pulse summaries, and its source field and animal-group checks. We write new code and reuse no fitted model.
- After recording and cell type controls, two-way connections showed no clear extra time constant match in 589 human layer 2-3 temporal cortex pairs
Prior SCI work tested membrane time matching for electrical connection calls within mouse Pvalb cells. That is a different connection type and target.
- usesPulse coupling estimates did not clearly improve baseline voltage correlation predictions in fixed tests of 408 mouse V1 Pvalb pairs
Its source definitions and six-digit mouse grouping guided the new extraction. We verified its signed package and wrote new code.