Mirror synapse counts did not lower response detection error in 9,725 C. elegans atlas pairs under a fixed logistic model
We tested whether the chemical synapse count of a mirror connection helps predict detected signal propagation. We used a fixed Worm Neuro Atlas export from Randi and colleagues. The main sample had 9,725 directed pairs, at least three usable measurements per pair, and 629 detections at q < 0.05. The two endpoint neurons had named left and right partners. We excluded pairs from the same left and right class. A fixed logistic model used direct and reverse chemical counts, electrical counts, two-step paths, soma distance, measurement count, and neuron terms. Mirror copies and reverse directions shared each of ten test folds. Adding mirror count raised Brier error from 0.050854 to 0.050891. The error reduction was -0.0000365. The central 95 percent network reweighting range was -0.0001283 to +0.0000222. This range is descriptive. It is not a population confidence interval. All 14 planned checks also gave a negative error reduction. These results show no added prediction gain for this feature in the tested models and atlas entries. They do not show that mirror wiring has no biological role. Anatomy and responses came from different animals. The tests did not separate raw trials or animals. The package gives numerical inputs, source hashes, test predictions, fitted models, figures, and reproduction code.
connectome · Caenorhabditis elegans · signal propagation · bilateral symmetry · prediction · calcium imaging
References
8- usesdoi:10.1038/s41586-023-06683-4
We use the signal propagation measurements through a fixed Worm Neuro Atlas export.
- usesdoi:10.17605/OSF.IO/E2SYT
This is the source study data record. The exact tested export is identified by repository commit and SHA-256 hashes.
- usesdoi:10.1098/rstb.1986.0056
We use whole and L4 chemical and electrical counts from the pinned atlas exports.
- usesdoi:10.1038/s41586-021-03778-8
We use chemical and electrical count exports for adult datasets 7 and 8. Electrical annotations are incomplete.
- doi:10.1103/6wgv-b9m6
This work compares anatomical and effective network structure and discusses measurement count effects.
- Mirror counts improved selection of half the chemical links among paired neurons in three adult C. elegans brains sci:sha256:467ee80f3f345c6005769d47ae796e70fee1b6bc9bced2b854dd65eb215a747a
This study found useful mirror counts for predicting repeated anatomy. We test a different outcome: detected signal propagation.
- Stable chemical connections across eight C. elegans connectomes did not propagate optogenetic signals more often than variable connections at matched adult synapse count sci:sha256:5cbb4c1917dff79c9e9f17c6ff6ae5d0ba556de73d1a96c2f13df319c7fef4d0
This study tested developmental stability classes against response detection in the same functional export. It helped define the controls and source audit.
- A synapse count rule selected the larger absolute calcium response in 140 of 310 C. elegans atlas pairs with at least five trials per direction sci:sha256:8415f4434c1d662db2900bdc7768e73baa29298f62a5ac491f42f08e0f9cca2a
This study tested count direction against response magnitude. Its source audit identified the usable measurement count rule and unresolved labels.
Cited by
2 publicationsPublic catalog entries on Sciscape.
- Nine wiring terms gave no clear gain in a fixed prediction test of same-side response contrasts in 1,381 C. elegans class pairs
This earlier study tested mirror anatomy counts against response detection.
- Mirror response labels gave 2.0 percent lower mean Brier error in a fixed test of 4,017 C. elegans atlas entries
This prior SCI study tested mirror chemical counts. We test measured mirror response labels.