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Variable chemical wiring across 8 C. elegans brains did not predict more variable co-activity across animals; gap junctions in more brains gave stronger, and in moving worms more variable, co-activity

Question: do neuron pairs with wiring that varies between individuals also have co-activity that varies more between individual animals? We linked the eight Witvliet 2021 C. elegans connectomes (stable, developmentally dynamic and variable chemical connections; number of brains with a chemical synapse or a gap junction) to per-animal pair correlations in three whole-brain calcium data sets: Atanas 2023 (40 moving animals, 5,700 pairs), Baskoylu (27 moving animals) and Randi 2023 (112 immobilised, stimulated animals). Models controlled for adult synapse counts, per-neuron fixed effects, soma distance, ganglion and the mean. Inference used 2,000 QAP permutations and 1,000 animal bootstraps; the plan was written first. Result: pairs with only variable chemical connections did not have a larger across-animal spread than pairs with stable connections (Atanas log SD difference -0.004, 95% CI -0.073 to 0.082). Each additional brain with a gap junction increased the mean Fisher z (0.024, 0.022 and 0.009 per brain; all QAP p < 0.003) and, in the two moving data sets, also the across-animal SD (+3.3% and +3.2% per brain), not decreased it. Neuron-level wiring variability did not predict profile consistency. A post hoc split-half analysis put the extra spread mostly between animals with all labels, but not with high-confidence labels only. Limitations: wiring and activity come from different animals; few pairs have highly stereotyped gap junctions; label errors and state changes can explain part of the spread.

C. elegans · connectome variability · gap junctions · whole-brain calcium imaging · individual differences · structure-function · Witvliet 2021 · functional reproducibility

Admitted 2 citing publications

References

12
  1. usesIn 40 freely moving C. elegans, gap junctions predict pairwise co-activity after controls for neurite contact, soma distance and per-neuron effects; chemical synapse weight does not sci:sha256:a250df14782a179b8bee744662c1a654f7fcf33a416f07366774b9b9bb58ab5a

    We reuse its Atanas per-animal pair correlation table, soma positions, contact table and processing recipe.

  2. usesGap junctions predict pair co-activity in three of four C. elegans whole-brain data sets, in moving and immobilised worms; the link is weak in the Randi 2023 stimulation recordings sci:sha256:fea404fc826486791a933e7997984e6864538661c3296f9983f3c22227c76e3e

    We reuse its Baskoylu, Randi and Kato per-animal pair correlation tables.

  3. Presence in two adult worm maps gave no clear evoked-response prediction gain in 1397 selected pairs sci:sha256:7764c3fd656f8a0afe85d50fd7400030e7f33bca671aee510f4ac5373f42ec70

    It tested two-adult-map edge presence against evoked responses; we test eight-brain stereotypy against spontaneous co-activity spread.

  4. Homologous synapse counts vary less than Poisson sampling in 8 C. elegans and more than Poisson in larval and 3 adult Drosophila connectomes; neuron gains remove half of the fly excess sci:sha256:fc45a3bbacfe312efc4feb894ffe1069894afd046e9d4dab9f1dba9dcc0e9f69

    Related analysis of synapse count variability across the same eight worm connectomes.

  5. Predicted neuropeptide routes did not increase spontaneous co-activity or evoked responses in C. elegans after wiring and neuron controls; a small negative co-activity link was not matching-specific sci:sha256:bcd56cbbaf2b2a6017163f45c5983596ff749473db319cb2d95cfad91faaaaa6

    Related C. elegans structure-function test on the same activity data.

  6. doi:10.1038/s41586-021-03778-8

    Witvliet et al. 2021 connectomes and connection classes.

  7. doi:10.1016/j.cell.2023.07.035

    Atanas, Kim et al. 2023 whole-brain activity data.

  8. doi:10.1038/s41586-023-06683-4

    Randi et al. 2023 activity data.

  9. doi:10.1016/j.cell.2015.09.034

    Kato et al. 2015 activity data.

  10. doi:10.5061/dryad.w9ghx3g4v

    Baskoylu and Flavell data set.

  11. https://github.com/dwitvliet/nature2021/tree/0646af9d25896ae660f97d462eab2d67282f5625

    Exact source commit of the connectome files.

  12. https://zenodo.org/records/19388374

    Atanas raw traces and NeuroPAL labels.

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