Electrical links marked positive calcium coactivity after behavior projection in 21 C. elegans baseline recordings
We tested whether electrical anatomy marks shared calcium activity after adjustment for recorded behavior. We used the full available Cook hermaphrodite connectome with 302 neuron slots and named neurons from the Atanas and Kim data. The main panel had 54,645 observations of 8,168 somatic neuron pairs in 21 baseline recordings. Pairs of the same neuron class were excluded. A separate regression in each recording controlled chemical wiring, shared inputs and outputs, soma distance, ganglion, and endpoint neuron identity. Within-record behavior projection reduced the mean electrical-link coefficient from 0.098 to 0.044 Fisher z units, a 55% reduction. The residual mean had a 95% recording bootstrap interval of 0.033 to 0.055 and was positive in 20 of 21 recordings. In 19 other recordings before a heat stimulus, the mean was 0.036, with an interval of 0.024 to 0.050. The association remained with measured membrane contact controls on restricted panels. Independently shifted neural traces gave mean coefficients near zero. A planned behavior model failed prediction diagnostics. We preserve that run and identify the revised analysis as exploratory. The result is conditional on fixed anatomy and the fitted behavior basis. It does not estimate direct electrical conductance. The package includes figures, derived pair data, source hashes, code, and repeat instructions. A second complete run reproduced seven main output files byte for byte.
C. elegans · connectome · gap junction · calcium imaging · behavior adjustment · shared neural activity · membrane contact · reproducibility
References
8- usesdoi:10.1016/j.cell.2023.07.035
We analyze its freely moving neural and behavior recordings and extend its electrical-link correlation result.
- usesdoi:10.5281/zenodo.19388374
This fixed version 4 record supplies the activity archive and NeuroPAL labels.
- usesdoi:10.1038/s41586-019-1352-7
We use the whole-animal hermaphrodite adjacency workbook corrected in July 2020.
- usesdoi:10.1098/rstb.1986.0056
Its historical anatomy export supplies an electrical annotation check and underlies part of the composite anatomy.
- usesdoi:10.1038/s41586-021-03778-8
Separate adult exports supply electrical annotation checks without merging maps.
- usesdoi:10.1038/s41586-021-03284-x
Its revised membrane contact measurements underlie the reused SCI contact table.
- usesContact area controls reduced excess overlap of electrical and two-way chemical links in JSH and N2U maps of 175 neurons sci:sha256:ab09563dcf6eb2f2dc84925fc5afcbe60cefca57cd3332521d5d852d1de84927
We reuse its CC BY 4.0 derived JSH and N2U pair table for measured contact controls. Source notices are preserved.
- A fixed model gave a 0.000009 mean Brier gain from two-step electrical paths in 15,384 C. elegans atlas pairs sci:sha256:30bb85f878cb4de5527fb9dead6babbf392790e1725b9aa46f2dcfec6298905b
This prior study tests electrical paths against detected stimulation responses. We test correlations during freely moving activity.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- Electrical counts had a positive adjusted term for calcium response correlation in 23 C. elegans records, but repeat coverage changed the estimate
Prior SCI work tested electrical wiring and calcium coactivity after behavior controls in freely moving worms.
- usesElectrical weights gave no clear gain for new pairs of neuron classes in a ridge test of calcium coactivity in 27 C. elegans
This study motivates behavior projection and its limits. We extend the question to a separate copper dataset and prediction for class pairs excluded from fitting. We reuse no code or data table.
- usesAt gain one, a passive electrical path score reduced calcium test error by 0.41% or increased it by 0.52% across five class splits in 21 C. elegans
We reuse the verified pair table and its behavior-projected calcium correlations. Our graph loader follows its source parsing rules.