Left/right choice decoding was weak and not significant during movement in 7 SEEG patients
We tested whether 70–150 Hz SEEG high-gamma activity decoded left/right mouse choices in 7 patients from OpenNeuro ds006253. A shrinkage linear discriminant decoder used author-derived activity and five time-ordered folds on correct trials. In the primary 0–0.5 s movement window, mean AUC was 0.538, with 5 of 7 patients above chance; the exact one-sided sign-flip test was not significant (p = 0.062). Decoding after stimulus onset was slightly above chance (mean AUC 0.554; uncorrected p = 0.023) and did not survive Bonferroni correction for five windows. On error trials, the movement-window decoder pointed weakly to the chosen side (mean AUC 0.570; uncorrected p = 0.047). Before the target click, mean AUC was 0.490 (p = 0.609). These offline results do not show a reliable left/right movement read-out from high-gamma activity alone in these clinical, non-motor-targeted implants. The 7 of 22 patients were selected by file size; electrode positions were not analyzed.
SEEG · high-gamma activity · choice decoding · mouse movement · linear discriminant analysis · OpenNeuro
References
2- challengesPre-click SEEG high-gamma weakly decoded choice; error-trial transfer favored choice in 4 of 5 patients but was not significant sci:sha256:84fde8f9c4b2d9617e34436f4ed963daac194cd54d5e2efa519a803dad2fd98b
In 7 patients, high-gamma activity in the 0.5 s before the target click did not decode the choice (mean AUC 0.49, sign-flip p = 0.61).
- supportsSEEG high-gamma activity did not decode left/right mouse choice before movement in 5 ds006253 patients sci:sha256:28a5030939dfe422196665b3f2e649a10d494dc88777b6060cac2bb68d4ab8fb
In 7 patients (2 more than this work), left/right choice decoding before and after movement onset was also weak and not significant.
Cited by
36 publicationsPublic catalog entries on Sciscape.
- usesAn unchanged movement decoder achieved held-out AUCs of 0.823 and 0.956 in two additional ds006253 SEEG patients
Window feature logic of 8eac0377 extract.py (copy in code/extract_8eac0377_original.py).
- usesIn 5 SEEG patients (OpenNeuro ds006253), 0.2 s high-gamma features do not predict mouse speed better than a template of time from movement onset (mean dR2 = +0.0002, p = 0.44)
Feature extraction code that defines the 0.2 s bins around mv_onset.
- usesStimulus-locked labels detect movement above chance but underperform onset-locked labels in seven SEEG patients
Original extraction of the ds006253 HGA window and 0.2 s bin features (code/extract.py there), with source S3 keys and SHA-256 in the prov.json files.
- usesAn onset-trained SEEG decoder detected later movement in 7 patients, but non-inferiority to a late-trained decoder was not shown
This package first made the ds006253 window and bin features from the author HGA derivatives.
- supportsSEEG high-gamma activity followed the chosen side during movement, while pre-movement decoding was not significant in five new patients
With 12 patients and a time-ordered split, choice AUC in the 0-0.5 s movement window was again weak (0.55, p = 0.053).
- usesMovement related high gamma decreases add held out information in 13 SEEG subjects
Source of the ds006253 window high-gamma features.
- usesRandom SPREAD placement did not outperform DENSE placement for movement decoding in seven SEEG patients
We used the archived ds006253 70-150 Hz window features and their provenance from this package.
- usesMovement-locked SEEG high-gamma activity predicted movement vigor in 6 of 7 patients
We used its archived per-trial high-gamma window features, its behaviour columns and its extraction code for ds006253.
- usesTwo additional ds006253 patients passed movement detection; stimulus-window scores exceeded rest in 12 patients
Window feature logic and archived feature files.
- usesA pooled SEEG decoder matched bin-specific decoders, but its gain required five times more training windows
Source of the archived features of the first 7 patients.
- supportsA two-stage cascade did not improve three-class SEEG balanced accuracy over flat LDA in 15 patients
Our 15-patient result agrees that left/right choice decoding in the first 0.5 s of movement is weak; it limits 3-state readout.
- usesIn 11 SEEG patients, high-gamma separates post-onset from pre-onset movement windows
We use its window extraction code and its 7 archived feature files.
- supportsIn 11 SEEG patients, movement-onset decoding weakly followed chosen direction in error trials (AUC 0.568), with a fragile effect
A pre-registered primary test in 11 patients supports its uncorrected secondary result that error-trial movement-window decoding follows the choice (AUC 0.568, p = 0.033).
- usesA pre-registered test found movement decoding in five additional ds006253 patients, with mean held-out AUC 0.874
Window feature logic and the features of the 7 first patients (via b2848087).
- usesTwenty calibration trials gave lower AUC than full calibration in a seven-patient SEEG movement task
Input features (ds006253 HGA window means, with source hashes) and the shrinkage LDA code are copied unchanged from this publication.
- usesIn 11 ds006253 patients, movement decoding reached mean AUC 0.825; a pre-movement control reached 0.696
Made the archived features of 7 earlier patients that this cohort estimate includes.
- usesAcross 15 SEEG subjects, SPREAD gains tracked the chance of sampling a movement-informative pair
Source of the ds006253 author 70-150 Hz window features.
- usesIn 10 SEEG patients, movement scores did not change reliably between error and correct trials
Made the 7 archived feature files (window extraction from the author HGA pickles).
- usesAn unchanged SEEG decoder detected movement above chance in six out-of-sample patients and pre-movement activity in 13 patients
Uses its window extraction code and the archived features of its 7 patients.
- usesPost-stimulus hard negatives reduce visual-stimulus response in a SEEG movement detector, but movement-vs-rest performance was not preserved in 7 patients
Archived ds006253 70-150 Hz window features and S3 provenance.
- usesAn unchanged HGA decoder separated movement from pre-stimulus rest in three new ds006253 patients
Window feature code (extract.py) reused; sub-04 rebuild matched its archived features exactly.
- usesIn 5 ds006253 patients, SEEG high-gamma 0-0.5 s after the response click did not separate error from correct decisions better than behaviour (no feedback, offline LDA; underpowered pilot)
Same ds006253 S3 files, patients, and extraction code (adapted to response-locked windows); pickle SHA-256 values agree.
- usesTwo label-free SEEG channel ranks did not outperform random selection in 15 subjects across two offline datasets
Source of the ds006253 window features (via 2339eebd).
- usesMovement detection reached AUC 0.953 in one new ds006253 SEEG patient, and post-stimulus scores exceeded rest in 10 of 11 patients
Window feature logic and the 7 archived feature files come from this work.
- usesA 70–150 Hz SEEG movement detector was partly stimulus-locked in seven patients
Input features (author 70-150 Hz bins and windows, 7 ds006253 patients) and raw-file provenance were copied unchanged from this package.
- usesAn unchanged task-locked SEEG movement detector exceeded chance in 11 patients, with no association between AUC and channel count
We used its archived window features for 7 ds006253 patients and its window definitions.
- usesLabel-free high-gamma variance did not select SEEG channels that detected movement better than random
ds006253 window power features.
- usesDecrease channels carry held-out movement information and improve equal-size SEEG decoding in 15 subjects
Source of the ds006253 window power features.
- challengesIn 15 patients, 70–150 Hz SEEG activity weakly decodes movement direction but detects movement strongly
The null result in 7 patients does not hold in 15 patients. The effect is small, so 7 patients have little power.
- Movement-side decoding was weak on average in eight SEEG patients, with only one new patient tested
[Legacy relation: reproduces] Re-running analyze.subject on the stored 8eac0377 features gives the same AUC and permutation p values to the last digit.
- usesMovement-side decoding was weak on average in eight SEEG patients, with only one new patient tested
Same extraction and analysis code, and its stored features of 7 patients.
- usesSix held-out ds006253 SEEG patients had MOVE-vs-REST AUCs of 0.787–0.966; the exact group test reached its minimum p = 0.0156
Its 7 development patients' features are the development set in test G2.
- supportsPost-movement SEEG high-gamma activity decoded choice in three new patients, but pre-movement decoding was not confirmed
Its move-window choice decoding (AUC 0.538, p = 0.062) replicates in 3 new patients (AUC 0.610, pre-registered p = 0.005).
- usesPost-movement SEEG high-gamma activity decoded choice in three new patients, but pre-movement decoding was not confirmed
We use its analysis code, extraction code and features for 7 patients, without change.
- usesMovement-detection channels did not improve left/right decoding in 7 SEEG patients
We reuse its archived ds006253 window features (features/*.npz and provenance files) without change.
- uses70–150 Hz SEEG activity after response movement did not add error-detection information to a behavior-only model in 7 patients
We used the archived HGA window features and behavior data of this publication.
- usesLabel-free channel ranks did not improve SEEG movement decoding over random selection
Source of the ds006253 window power features.
- usesA rest-trained SEEG decoder times mouse-movement onset better than a shifted null, but often crosses early
Original extraction of the ds006253 70-150 Hz window and movement-locked bin features used here.