Five pulses increased contact rank agreement in seven limbic SEEG patients after fixed reference correction

1. usesdoi:10.18112/openneuro.ds004696.v1.0.1

   This exact OpenNeuro release supplied the SEEG derivatives used in the analysis.

2. doi:10.1523/JNEUROSCI.2201-22.2023
3. doi:10.1111/epi.17528

Public catalog entries on Sciscape.

• usesPilot allocation gave an uncertain mean waveform loss decrease in seven limbic SEEG patients with fixed source correction

  The study uses the exact trial matrices and voltage examples from this publication. It tests a new pulse allocation question with the same patients and fixed source correction.

• usesFive pulses gave smaller 100–500 ms peak gaps than two pulses in seven limbic SEEG patients after fixed correction and 45 Hz filtering

  This work uses the fixed cohort selection, source identities, and metadata records. It retrieves the corrected voltage epochs and tests peak time repeat in the same cohort.

• usesForward and reverse 1–45 Hz filtering made baselines depend on input after stimulation in 137 one-second SEEG averages from seven patients

  We used its verified public trial archives and source selection records. They supplied the first eligible group for each of seven patients. We calculated exact averages from all 137 saved contact examples.

• usesLate SEEG variance exceeded pre-pulse variance after mean waveform removal in seven selected ds004696 patients

  This study kept the original group eligibility rules and first-ten-good-pulse selection from this publication. The preserved records give the initial selection and source procedures.

• usesBaseline energy division increased log energy variance across seven SEEG patients after fixed source correction and pulse order adjustment

  This publication supplied the exact trial Gram matrices, voltage examples, source records, author code, and selection rules. We used their diagonals for a new per-pulse log energy variance audit. All 131 inherited file hashes matched.

• usesA bounded shift model reduced the mean relative prediction gap to two free waveforms in seven selected SEEG patients under fixed source correction

  This publication supplied the inherited patient, stimulation group, contact, and pulse selection. All 80 inherited groups were retained; the new score did not select the sample.

• usesTwo shared time waveforms gave lower mean 100 to 500 ms prediction loss than one in seven selected limbic SEEG patients under fixed source correction

  We used its frozen group, contact, and first-ten-pulse selections and source provenance. We applied the inherited exclusion of all response contacts on stimulation shafts.

• usesA bounded shift model reduced the mean relative prediction gap to two free waveforms in seven selected SEEG patients under fixed source correction

  This publication supplied the inherited patient, stimulation group, contact, and pulse selection. All 80 inherited groups were retained; the new score did not select the sample.

• usesEarly energy reduced mean late energy prediction error at excluded stimulation pairs in seven SEEG patients after fixed source correction

  This publication supplied exact trial inner product data, preparation code, pinned source metadata, and checks. These files enabled the excluded pair prediction test.

• usesMean relative energy change was -0.275 dB between selected three-pulse blocks in seven SEEG patients with fixed source correction

  This publication supplied the exact trial inner product matrices, voltage examples, selection records, source event metadata, source hashes, and retrieval method. We used these inputs to calculate individual trial energy changes.

• usesEnergy centroids reduced repeat timing gaps more before than after stimulation in seven SEEG patients with fixed 400 ms windows

  This work keeps the earlier stimulation group and off-shaft contact selection, pulse mappings, and source processing rules. It does not select the cohort by the new timing results.

• usesEnergy before a pulse gave mixed prediction gains in 80 SEEG groups from seven patients after block mean removal

  The original fixed event and contact selection, raw contact trial products, and voltage examples enter through the cited parent archive. We preserve their byte identities and use them for independent waveform and source checks.

• usesThe estimated distance relation to SEEG waveform agreement differed across seven patients under fixed source correction

  Its original trial reduction and preparation code define the saved input sample and the source rebuild recipe.

• usesEnergy mean times reduced repeat gaps more before than after limbic stimulation in seven SEEG patients with fixed correction and 45 Hz filtering

  This publication supplied the upstream eligible group selection. We kept its cohort through the immediate parent and then used the parent's contacts outside stimulation shafts.

• usesTwo free waveforms gave lower mean relative 100 to 500 ms SEEG prediction loss than a fixed derivative model in seven selected patients under fixed source correction

  We used its fixed contact and pulse selection. This selection defines all 80 groups in the present test.

• usesWaveform agreement from 500 to 1,000 ms after stimulation increased in 3 of 4 SEEG patients under local bipolar and linear trend correction

  Its source preparation records and small matrices were inherited through publication 23ef7bd8-9731-4aed-a382-ebe5a9d7abda. They provided event and channel checks for new source extraction.

• usesWaveform agreement was higher after limbic stimulation than before it in seven SEEG patients under fixed source correction

  Its pinned trial Gram matrices, source metadata, example voltage traces, and retrieval code supplied the exact inputs for the waveform agreement and energy audit.

• usesShrinkage reduced five-pulse waveform prediction loss in seven limbic SEEG patients after fixed source correction

  We used the exact trial Gram matrices, frozen contact and group selection, and source provenance to test waveform shrinkage.

• usesSEEG contact differences had higher waveform agreement after pulses in seven fixed limbic groups with block and time centering

  We used its seven unchanged voltage example files, BIDS metadata, and pinned source records. Its full source checks are inherited. We adapted its extraction code for the new retrieval recipe.

• usesA sign flip test did not detect higher direction agreement after stimulation in seven SEEG patients. Source correction was fixed, and the test assumed independent patients and null sign symmetry.

  We used its exact ten-pulse trial inner products, source metadata, source hashes, and preparation code. These files enabled the reciprocal direction analysis. The parent pulse-count result was not the tested endpoint.

• usesA joint exchangeability test found excess adjacent residual waveform similarity mainly from one of seven SEEG patients

  This publication supplied the fixed seven-patient cohort, exact trial Gram matrices, waveform examples, preparation code, and pinned source records. The new study tests adjacent residual similarity. A fresh full sub-01 reconstruction matched all 13 compact arrays.

• usesMean log voltage variance rose after limbic stimulation in seven SEEG patients with block and time mean removal

  It defined the inherited contact and trial rules and original compact products. New complete public source downloads reproduced those products.

• usesTrial energy correction gave no clear rank agreement gain in seven limbic SEEG patients with a fixed source reference

  We used the exact trial inner products, saved voltage examples, fixed cohort, source preparation code, and provenance from this publication. We tested energy correction with all five-versus-five trial splits. This is a new question in the same patients.

• usesPeak times from four pulse means agreed within 5 ms more often after limbic stimulation than before it in seven tested SEEG groups under fixed source correction

  This publication supplied the exact full example voltage arrays, source hashes, and group and pulse eligibility records. We extracted matched timing windows and tested peak times with separate selection and timing pulses. The same patients are used; this is not an independent cohort replication.

• usesA sign flip test did not detect a larger pulse order ratio after stimulation in seven limbic SEEG patients under independent symmetric null effects

  We used seven exact trial matrix files, their selection records, and source event metadata. They supplied ten selected pulses from 80 stimulation groups in seven patients. The new analysis tests waveform order with all balanced pulse splits.

• usesThe mean response to baseline energy ratio fell between two sets of five good pulses in seven limbic SEEG patients with fixed source correction

  We reused exact trial inner product matrices, fixed cohort selection records, metadata, and preparation code. These inputs enabled a new test of ordered trial energy. The present study shares the source cohort and is not an independent replication.

• usesCross-pulse energy reduced pre-pulse rank agreement more than post-pulse agreement in five-pulse maps from seven limbic SEEG patients with a fixed reference

  We used the fixed ten-trial inner products, example voltage traces, selection records, source hashes, and retrieval code. These files permitted an exact energy comparison across all 126 complementary five-pulse partitions. The prior conventional rank summaries informed the question. The source reference correction stayed fixed.

• usesPost-pulse variation gave lower loss for separate 100 to 500 ms SEEG repeat gaps in seven selected patients after fixed correction and time mean removal

  This study keeps the original group eligibility and first-ten-good-pulse rules. The preserved source metadata and event audit give the source identities and fixed trial selection.

• usesEnergy from different trials reduced contact rank agreement more before than after stimulation in seven SEEG patients with fixed source correction

  We used its fixed seven-patient cohort, seven compact trial energy matrix files, source metadata, source hashes, and preparation code. These inputs enabled a new comparison of average-waveform energy and energy from different trials across all five-pulse partitions. Fresh builds from pinned public MATLAB files matched all arrays in 5 of the seven included inputs. All seven archived inputs matched the cited publication hashes.

• uses100–500 ms SEEG energy correlation between shafts exceeded pre-pulse correlation in three of seven selected ds004696 patients after trend removal with assumed source trial order

  This work keeps the original 80-group, seven-patient selection and the first ten good exported trials per group. The preserved event rows and source metadata define the tested scope.